Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241672g00009 ATGAGAGCCAAAGGCTCGAGATCTTCCATTCACTCCCTTCTCGAAAACGGCTGCAAGTTTGCAACCCTAACTGCTTTCTCTTACCGCCGCCACTCCATCACCCCCGCTTCTCCACAATTTATAGTTGGTTGGACAGCAATGATGCATATTTACTGGTCATCTGATCTCGGAATAAGGAATGTTTGGCGTGTTATAGACTTTGGAAGTGGAATTGACGAATTCACATTGAAGCATTTATATGGTTCAACTGGGCCTTCTAGAGCTGAACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACGTGGTGTGAAGGGCCAACAAGCTCAACTTTGAAATACAACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAAATGTTTTCCAGATCGATGCTTTAACACAAACTCTTTTGGACCAGCATCTTGACGGCTGGAATGAGGGTGTGAAGGAGCTGGCTCACAAGTAA 492 0.4451 MRAKGSRSSIHSLLENGCKFATLTAFSYRRHSITPASPQFIVGWTAMMHIYWSSDLGIRNVWRVIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWCEGPTSSTLKYNMWSVGVVMLELVLGTPNVFQIDALTQTLLDQHLDGWNEGVKELAHK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241672g00009 163 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241672g00009 163 Gene3D Transferase(Phosphotransferase) domain 1 48 161 - -
Stsc241672g00009 163 SUPERFAMILY Protein kinase-like (PK-like) 60 139 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241672g00009 Stsc-Chr241672 51566 52871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241672g00009 53 163 PP2C-type Phosphatase Gene Family AT3G63340 64.865 1.75e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241672g00009 - - gmx:100781476 191.43