Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241671g00031 ATGCATTTCATCAAATTCAATATTCTTCTTGTGATAGCTTTGGTTTCAACAACACTGGTCTCTTGTTATGCATACCCTGGCTTCAATTTTGGTTGGGGTGGAAGAAACCATGGAAGTAGGGGAGGAATATCTTATGGTCTTTCTCCTCAGTTCTACCAATTTTCATGCCCTCAAGCCAATGACATTGTCATGTCAGTCTTGGAGAAAGCCATGGCTAAAAATATGAGAATCGCTGCTTCTCTTCTTAGACTTCACTTCCATGACTGCTTTGTCCAGGGCTGCGATGCTTCGATTTTGCTGGACGATAGCCCTGCGATAGTGAGCGAAAAGAACTCCGGCCCGAACAAGAATTCCATCCGAGGTTTCGAGGTGATCGACGAGATAAAAGCTAAGTTGGAAGAAGCATGCCCTCAGACTGTGTCTTGTGCAGACATTCTTGCTCTTGCAGCAAGAGGCTCCACTATTCTTAGTGGAGGGCCTAATTGGGAGCTACCATTAGGGAGAAGAGACTCCAATAAAGCAAGTTTAATTGGTTCAAACAATAACATTCCACCACCAAATGCCACCATTGAAAATCTAATTACATTCTTCAAGCGTCAAGGCCTCGATGAAGTTGACCTTGTTGCCCTCTCAGGTGCACATACTATTGGGGTGGCACGGTGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAAGAACGAAGCAGATGTGTCAATAGAAAGAACCTTCTTCTTTGGTTTGAAGACAATGTGTCCAAGATTAGGTGGTGACAACAACATTTCCCCATTGGACTTTGGTTCTCCGAGGATGTTTGATAACACATACTTCAAGTTCATCATTCAAGGAAGAGGCTTACTCAATTCAGATCAAGTTCTTCTCAATGGCGGTGTCAAGAAGACTCAAGAACTTGTCAAGAAATATGCTCAAGATGAGAGTTTATTCTTCCAACAATTTGCTATGTCTATGGTGAAAATGGGAAACCTTCGTCCCATCACCGGATTTAACGGCCAAGTTAGAAAGAATTGTCGCCGACCTAATTAA 1047 0.4269 MHFIKFNILLVIALVSTTLVSCYAYPGFNFGWGGRNHGSRGGISYGLSPQFYQFSCPQANDIVMSVLEKAMAKNMRIAASLLRLHFHDCFVQGCDASILLDDSPAIVSEKNSGPNKNSIRGFEVIDEIKAKLEEACPQTVSCADILALAARGSTILSGGPNWELPLGRRDSNKASLIGSNNNIPPPNATIENLITFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQNGKNEADVSIERTFFFGLKTMCPRLGGDNNISPLDFGSPRMFDNTYFKFIIQGRGLLNSDQVLLNGGVKKTQELVKKYAQDESLFFQQFAMSMVKMGNLRPITGFNGQVRKNCRRPN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241671g00031 348 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 ProSiteProfiles Plant heme peroxidase family profile. 46 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 PANTHER PEROXIDASE 72-RELATED 45 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 FunFam Peroxidase 184 327 - -
Stsc241671g00031 348 Gene3D Peroxidase, domain 2 184 328 - -
Stsc241671g00031 348 SUPERFAMILY Heme-dependent peroxidases 46 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Stsc241671g00031 348 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601
Stsc241671g00031 348 Pfam Peroxidase 65 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241671g00031 348 FunFam Peroxidase 50 191 - -
Stsc241671g00031 348 CDD secretory_peroxidase 46 346 IPR033905 GO:0004601|GO:0042744
Stsc241671g00031 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Stsc241671g00031 348 Gene3D - 51 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241671g00031 Stsc-Chr241671 222192 224407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241671g00031 24 345 Peroxidase AT1G44970 72.050 2.40e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241671g00031 K00430 - gmx:100795020 566.614