Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241671g00020 ATGGCCTCATCCAGTGGAAACTCATCCATATCCACTAGATTTTGTGGCTCCGAAGAGGATTTGCAGCAACTGATGGACCAGAGAAAGAGGAAGAGAAAGCAGTCAAATCGCGAATCGGCGAGGAGATCTAGAATGAGGAAGCAAAAGCACTTGGATGACCTAGTTACTGAGGTTGAGAGGCTTAGGAAGGAGAACAATGAGATCCTCAATGGAGTTAAGATCACAACACAAAAGTTCCTCAATCTTGAGGTTGAAAACTCCATCTTAAGGGTCCAAATGAGTGAACTTAACAAAAGGCTTCAATCACTCAATCATATGCTTAGCTTCTTCAACAACAATAATAACATCACTACAAGCACTAATACTATTGCTACTACCACTTTTGGTAGTGAATTCTACCATGATAATAATTTCGTGATGAATAATAATCATCATCACATTAATAACATGGTGTACCTTAACCAACCCATCATGGCATCTTCAAATCACATGTTTGAGTGGTGA 504 0.3948 MASSSGNSSISTRFCGSEEDLQQLMDQRKRKRKQSNRESARRSRMRKQKHLDDLVTEVERLRKENNEILNGVKITTQKFLNLEVENSILRVQMSELNKRLQSLNHMLSFFNNNNNITTSTNTIATTTFGSEFYHDNNFVMNNNHHHINNMVYLNQPIMASSNHMFEW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241671g00020 167 Coils Coil 93 113 - -
Stsc241671g00020 167 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Stsc241671g00020 167 MobiDBLite consensus disorder prediction 25 51 - -
Stsc241671g00020 167 Coils Coil 44 71 - -
Stsc241671g00020 167 Coils Coil 18 41 - -
Stsc241671g00020 167 Gene3D - 26 79 - -
Stsc241671g00020 167 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 89 IPR004827 GO:0003700|GO:0006355
Stsc241671g00020 167 FunFam BZIP transcription factor 26 77 - -
Stsc241671g00020 167 CDD bZIP_plant_GBF1 29 79 IPR045314 GO:0003700|GO:0006355
Stsc241671g00020 167 PANTHER BZIP TRANSCRIPTION FACTOR 44 11 162 - -
Stsc241671g00020 167 Pfam bZIP transcription factor 28 68 IPR004827 GO:0003700|GO:0006355
Stsc241671g00020 167 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
Stsc241671g00020 167 SUPERFAMILY Leucine zipper domain 28 81 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241671g00020 Stsc-Chr241671 173165 173668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241671g00020 22 165 bZIP Transcription Factor Family AT4G34590 49.655 7.79e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc241671g00020 bZIP_1 6.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241671g00020 K25786 - twl:120000953 163.696