Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241671g00017 ATGTTAGAAATTGTAGAACTANNNNNNNNNNCAATTACCATAATAACCCCATGTGCTCCAACACCAAAACACTCACTCTATCTATCAAATCTTGATGATCAAAAGTTCCTAAGGTTCTCAATTAAGTACTTGTACTTGTTCAAGAAATCAGTGAGCATTGAAGCCTTCAAGTGTTCGTTGTCAAGGGTCCTTGTTGATTACTACCCTTTGGCCGGAAGATTGATGAGAAGCAATAATAATAACAATGATGATGATGATCACAAGCTTGAGGTGAATTGCAATGGAGAAGGTGCTGTTCTTGCTGAGGCTTTCATGGATGCAACTATTGAAGACTTGATTGAGGCTTCTAAGGTTCCTAACAAGTCATGGAGGAAGCTTATGTATAAGGTTGAAGCTCAAAGTTTCTTGGATATTCCTCCTCTTGTTGTTCAGGTGACTAATCTCCGTTGTGGGGGCATGATCCTGTGCACCGCGATCAACCACTGTCTATGTGACGGCATAGGCACTTCACAGTTTCTAAATGCGTGGGCCCAACTCACAAAGAATCCCAACACTAAATTGACCATTATACCCTTCCACGGGAGACACGTGTTGAAACCTCGTGATCCCCCTCAGGTGAGGTTCTCTCACCCGGGATATACCAAAACAAAGTCCACCCAACAAGTGGAACTCCTCAAGTTGATGCAATCTCAACCGCTAGTTGCCACGTCATTCACCTTTGGGCCTCACCAAGTGCTTCAACTAAAGAGAAATTGCATTCCCTCCTTGAAATGCACAACCTTCGAGGCCGTCGCAGCTCACACGTGGCGCTCGTGGGTTGGCTCGCTTAACCTGAATTCTGACCTAGTAGTAAAATTACTTTTTTCTATCAACATAAGAAAATGCATGAACCTCCCACAAGGGTATTATGGGAATGGATTTGTTCTAGGGTGTGCACAAAGTAAAGTGAGGGATTTAGTAGTGAGTGACGATAATAACCTTCATCATGGGGTGAAATTAGTGCAACAAGCTAAGGCTACTACTTTGGAAAATGATGGGGAATACATTAGGTGTATGATTGATTTCATGGAGGACAAGAATGTAAGAACTGATCTTTCTACTAGCATGGTTATATCACAATGGTCTAAGCTAGGGTTAGAAGATTTGGACTTTGGAGAAGGGAAGCCATTGCACATGGGACCTTTAACAAGTGATGTCTATTGCTTGTTTGTGCCCGTGGCCGGCGACGCCAACTCGGTTAGGGTTCTCGTGTCGGTGCCGGAGACTATGGTGGAGAGTTTCCGGCACCACATGATGGTGAAGGAAAGTTGGGAAAGTCATCATGAGAAGAGTGAAGATGTTAACACAAATGGATATCATGTGCAAGAAAAGTTGCTAATATGA 1383 0.4302 MLEIVELXXXXITIITPCAPTPKHSLYLSNLDDQKFLRFSIKYLYLFKKSVSIEAFKCSLSRVLVDYYPLAGRLMRSNNNNNDDDDHKLEVNCNGEGAVLAEAFMDATIEDLIEASKVPNKSWRKLMYKVEAQSFLDIPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLNAWAQLTKNPNTKLTIIPFHGRHVLKPRDPPQVRFSHPGYTKTKSTQQVELLKLMQSQPLVATSFTFGPHQVLQLKRNCIPSLKCTTFEAVAAHTWRSWVGSLNLNSDLVVKLLFSINIRKCMNLPQGYYGNGFVLGCAQSKVRDLVVSDDNNLHHGVKLVQQAKATTLENDGEYIRCMIDFMEDKNVRTDLSTSMVISQWSKLGLEDLDFGEGKPLHMGPLTSDVYCLFVPVAGDANSVRVLVSVPETMVESFRHHMMVKESWESHHEKSEDVNTNGYHVQEKLLI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241671g00017 460 Gene3D - 8 214 IPR023213 -
Stsc241671g00017 460 Gene3D - 215 432 IPR023213 -
Stsc241671g00017 460 Pfam Transferase family 13 431 - -
Stsc241671g00017 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241671g00017 Stsc-Chr241671 127771 130079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241671g00017 13 394 Monolignol Biosynthesis Gene Families AT5G48930 29.369 4.69e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241671g00017 - - aip:107645267 816.609