LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241670g00032	ATGGAGGAAGAGGATGAACATGGAAGCATTCAAAGCTTACTAACATGGGCATCACATATTGGAATATCGGATGCACCAACAACCACCGACCAACCTCATCACTCTCATGCTCTCGCTTCTTCTCTCTTTGTCTCTCACTTTCCTCACACTGGAGGTAGAGGTTTGGGTGCTGTAAGAGACCTTAGAATGGGGGAACTAATTCTCAGAGTTCCCAAATCTGCTTTGATGACAAGTGACAGTGTTATGCAAGATACAAAGCTCTCTGATGCTCTCAATAGGCACCCTTCTCTTTCTTCAACCCAGATATTGAATGTTTGTTTGTTGTATGAAATTGGAAAAGGAAAGGCTTCAAGATGGCATCCTTACCTCATGCATTTACCAAAGAGTTATGACATCCTAGCCATGTTTGGTGAATTCGAGAAAACTGCTCTGCAAGTGGATGAGGCTATATGGGTCACTGAAAAATCCGTGCTAAAAACCAAATCAGAGTGGAAGCAAGCTCGTGCTTTGATGGAAGATCTCAAATTTAAGCCCCAGCTTCTAACATTTAAGGCTTGGGTGTGGGCTTCTGCAACGGTATCTTCCCGGACATTACATATACCGTGGGATTCAGCTGGGTGTTTGTGCCCCGTGGGTGACTTGTTTAATTATGATGCACCCGGAAAGGAGCCATCTGACGTTGGGGATCTAGAGAATTTTCTTTCTAACTCTTTGATCCATGATGCTTCCTTCTCAAATGAAGACAATACTATAGTCGCAGATGCAGGGCAGCTTGATTCCGAGTCTTGGAGATTAACAGATGGGGGTTTTGAGGAAGATGCTAATGCATATTGCTTTTATGCTAGGGCAAATTACAAAAAAGGAGATCAGGTAGTAATTGAGTCATGCTTCTTATGTCACTGA	903	0.4319	MEEEDEHGSIQSLLTWASHIGISDAPTTTDQPHHSHALASSLFVSHFPHTGGRGLGAVRDLRMGELILRVPKSALMTSDSVMQDTKLSDALNRHPSLSSTQILNVCLLYEIGKGKASRWHPYLMHLPKSYDILAMFGEFEKTALQVDEAIWVTEKSVLKTKSEWKQARALMEDLKFKPQLLTFKAWVWASATVSSRTLHIPWDSAGCLCPVGDLFNYDAPGKEPSDVGDLENFLSNSLIHDASFSNEDNTIVADAGQLDSESWRLTDGGFEEDANAYCFYARANYKKGDQVVIESCFLCH	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241670g00032	300	SUPERFAMILY	SET domain	40	219	IPR046341	-
	Stsc241670g00032	300	Pfam	SET domain	52	292	IPR001214	GO:0005515
	Stsc241670g00032	300	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	9	293	-	-
	Stsc241670g00032	300	Gene3D	set domain protein methyltransferase, domain 1	8	294	-	-
	Stsc241670g00032	300	CDD	SET_LSMT	41	293	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241670g00032	Stsc-Chr241670	264283	266242	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SET	Stsc241670g00032		SET	5.6e-06	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc241670g00032	-		-	ahf:112702602	516.538