Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241669g00014 ATGGGATGCTTCTTCACACTTTTGAAGAAAAAGCTTGATCAAACCAAGCTCAAGAATCGAATCAACCGCAACAAGAACTTAGCTTCCCATCTATCTGAGCCTCAAAGACAGTCTGTCTCGTCGTCGTCGCTCTCTTCGCCGGCTAGTTTCCGGGCAGAGCCAATTAACCCGGTTTATCCTAACATTATTAACAACTTCCATGGAGGCCCAATTTCTGCTTCTTCGTCCTCTCTTAGTGAAGCAGAACAAGATGCTGTGGCCTCCATTGCACATGTACCACAACCAAGGAGTCAATATGGATTAACGAAGGGGCTGTTTCCAACAAATCCACATCCTGTCCCCCTTCCTCGTCCTCCTCCTCCTCATTCTCCATTGAAGGCTAATGTCAGCTCAAGTGGTACTTCTAGTAGTCCTTTGTCAGCTTCACGTACATCTTCACTTCGATACTACCGTTATGAGGAAATCTTAGCTGGTTGCCAAAATTTCTACTCTTCTGAAGATCGATGTGTGTTAGAGTGTGTTTCGCCAAATAATTTTAAAGCTTCCTTTGGTGACGAATCTTCATCAAGGACCGTAGAAGCTACTGTCATCCGTGTTAATCCTTCAACTCAGGACCTGAGGGACTTCATTAATGAAGTTAACACTCTTTCATCTTTGCAACATCCAAACATTTGTAGATTGATTGGATTTCATGCACGTGAAAGCTCAGAACCGAGGATGTTGCTGTATGAGAGGCTACACCTTGGAGGCTTGGACCACTTGCTTTTCTGTTCATCTGAAGATCACCCAGTACTACTTGATTGGAATTCAAGATTGAAAATCGCCATATGTGTTGCACAAGGTCTTGCTTTCTTGCATGATGAAGGGCCCTTCAAGGCAATGTACAAGGAATTTTCAACTGCCAACGTACAGGTTGAAAAAGATTTCAGTGCAAAGCTTTCAGGGTATGGTTGCGTAGGGGGGCGAAGCTTTTCGGAGAAAGCCATTGGAAACATGTCAATGGAAACATTCGAAAGAGGAATACTTACTCCAAAAAGCAATGTATGGAGTTTCGGAATCATGCTTCTGGAGCTACTCACCGGTAAAAAGAACCACGACAGCCGCCACCCAAGCGAAGACAGGAACATAGTCAAGTGGAGCTGGCCATACCTAAACGACGAATTTGGCCTATCCATGATCATGGATCCTCAGCTTAACGGCCAGTACCCAATAAAAGGGGCGCGGATGTTGGCTGACGTGGCGCATCAATGTCTCCAAAAGGAGCCATCGATCCGCCCCGCCATGCGAACACTCGTCAAGAATCTCAAGATGATACAAGAGATGAATTACTGCCGTGTCTCTCCATCATTGTTGTTGTCATCGTTGCGGCCAGAAGCTGTTAGGCCTAGATTGAGTGTCTCTCCGGCGTCACCACCGAGAAGCAACGATACGGTGGTGTCTCTGCCGTTGGCTTCCGGAGCACCCATGCTACATGCTTCGCGCATGCACACCAGGCTCCCCCGTCTGCCTTGTGGTTCCATATGCGTTGTGGAGAATAAGGTTGTTAGGCAGGAAACTAAGCACTGCCAGGAATCATCCTAA 1581 0.4668 MGCFFTLLKKKLDQTKLKNRINRNKNLASHLSEPQRQSVSSSSLSSPASFRAEPINPVYPNIINNFHGGPISASSSSLSEAEQDAVASIAHVPQPRSQYGLTKGLFPTNPHPVPLPRPPPPHSPLKANVSSSGTSSSPLSASRTSSLRYYRYEEILAGCQNFYSSEDRCVLECVSPNNFKASFGDESSSRTVEATVIRVNPSTQDLRDFINEVNTLSSLQHPNICRLIGFHARESSEPRMLLYERLHLGGLDHLLFCSSEDHPVLLDWNSRLKIAICVAQGLAFLHDEGPFKAMYKEFSTANVQVEKDFSAKLSGYGCVGGRSFSEKAIGNMSMETFERGILTPKSNVWSFGIMLLELLTGKKNHDSRHPSEDRNIVKWSWPYLNDEFGLSMIMDPQLNGQYPIKGARMLADVAHQCLQKEPSIRPAMRTLVKNLKMIQEMNYCRVSPSLLLSSLRPEAVRPRLSVSPASPPRSNDTVVSLPLASGAPMLHASRMHTRLPRLPCGSICVVENKVVRQETKHCQESS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241669g00014 526 MobiDBLite consensus disorder prediction 109 125 - -
Stsc241669g00014 526 Pfam Protein tyrosine and serine/threonine kinase 192 435 IPR001245 GO:0004672|GO:0006468
Stsc241669g00014 526 ProSiteProfiles Protein kinase domain profile. 168 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241669g00014 526 Gene3D Phosphorylase Kinase; domain 1 126 244 - -
Stsc241669g00014 526 MobiDBLite consensus disorder prediction 126 141 - -
Stsc241669g00014 526 PANTHER OS01G0588500 PROTEIN-RELATED 92 439 - -
Stsc241669g00014 526 MobiDBLite consensus disorder prediction 98 141 - -
Stsc241669g00014 526 Gene3D Transferase(Phosphotransferase) domain 1 247 447 - -
Stsc241669g00014 526 SUPERFAMILY Protein kinase-like (PK-like) 195 450 IPR011009 -
Stsc241669g00014 526 MobiDBLite consensus disorder prediction 23 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241669g00014 Stsc-Chr241669 143859 150014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241669g00014 145 441 Receptor kinase-like Gene Family AT4G02010 31.111 2.18e-42 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Stsc241669g00014 PK_Tyr_Ser-Thr 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241669g00014 - - gmx:100808712 438.728