Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241668g00015 ATGGCGGTCTCCGGCAACTCCTCCGGCGATCCTCTACCTGATTTGAACTCAACAACGTCGGTTCTTGGAATGAAGCTCGTCGTTCTAGTTGCGATTATCTTCATTGCGATTGTTGTAACGATCTTACTCATCTTCTTTCTCTGCTTCAGAAGAAGCAGAACCTCATCCTCTAGCAGAAACCACAGAACCCTCGGCAAGCATAGTTCAGGAACAATTCCTCTCGTTTCAAAGGAGATCAACGTCGTCAAATCCCTAGATCTCGAACAACAACAGCAGCAGAAGCAACAGAAGCAGATTCTCGAAGACGTTGTTGTTGTTGATGATCTAAAGAAGAAGAAGAAAGAGGAGGGGGAAGGTGAAGGGATCAAGAATAAGAAGAGTGAGGGAGAAGGGAGTGATGACGTGTCAGTTACGGGTGGGAGAAGGAGTGAGGCGTCGTCGTTGTCGGTGGAGGATCCGAACATAGGGTGGGGGAGGTGGTATAGTCTGAGGGAGGTGGAGGTGGCGACACGTGGCTTTGCGGAGGAGAATGTGATTGGTGAAGGTGGCTATGGAATTGTATACAGAGGAGTTCTTCAAGATGGTTCTGTTGTTGCCGTCAAGAATCTTCTCAACAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGTGGAGGTTGAAGCTATTGGAAAAGTAAGGCATAAGAATTTGGTTGGGCTTGTAGGATATTGTGCAGAAGGTCCAAAAAGGATGCTTGTTTATGAATATGTTAACAATGGAAATTTGGAGCAGTGGCTGCATGGTGATGTAGGACCAGTTAGCCCCTTGACATGGGATATTCGGGTGAAGATTGCCATTGGCACTGCTAAAGGGCTAGCTTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATATAAAATCCAGTAACATTCTTTTGGACAAAAACTGGAACGCCAAAGTATCCGATTTTGGACTTGCCAAGCTCTTAGGATCGGAGAAAACCCATGTGACTACGCGTGTAATGGGAACATTCGGATACGTTTCACCTGAATATGCAAGCACCGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTCGGAGTTCTACTCATGGAGATAATTACAGGAAGATGCCCCATTGATTATTCTAGACCACCTGGAGAGATGAATTTGGTTGATTGGTTTAAGGGAATGGTAGCAAATCGTCGCGGCGAAGAGTTAATTGATCCTTTAATTGAGGTTCAGCCCTCTCAAAGATCCCTGAAGCGAATGTTACTCATTTGTCTTCGCTGCATCGACTTGGATGTCGTAAAGAGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCAGATGATTTTCCATTTCGTTCTGAAATTCGTACACTTAAAGAGAAAGACCATGCGCCTCCTTCTGCAGATGTTTCAAGTAATAGAGTTCCATATGAATCAAAATATGCAGAGTCCTTAGGAAAATCAAGATGGAAATGA 1476 0.4472 MAVSGNSSGDPLPDLNSTTSVLGMKLVVLVAIIFIAIVVTILLIFFLCFRRSRTSSSSRNHRTLGKHSSGTIPLVSKEINVVKSLDLEQQQQQKQQKQILEDVVVVDDLKKKKKEEGEGEGIKNKKSEGEGSDDVSVTGGRRSEASSLSVEDPNIGWGRWYSLREVEVATRGFAEENVIGEGGYGIVYRGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPKRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDIRVKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRCPIDYSRPPGEMNLVDWFKGMVANRRGEELIDPLIEVQPSQRSLKRMLLICLRCIDLDVVKRPKMGQIVHMLEADDFPFRSEIRTLKEKDHAPPSADVSSNRVPYESKYAESLGKSRWK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241668g00015 491 Pfam Protein tyrosine and serine/threonine kinase 176 444 IPR001245 GO:0004672|GO:0006468
Stsc241668g00015 491 MobiDBLite consensus disorder prediction 460 491 - -
Stsc241668g00015 491 MobiDBLite consensus disorder prediction 115 148 - -
Stsc241668g00015 491 PANTHER OS01G0323000 PROTEIN 15 463 - -
Stsc241668g00015 491 Gene3D Transferase(Phosphotransferase) domain 1 249 457 - -
Stsc241668g00015 491 FunFam Putative receptor-like serine/threonine-protein kinase 249 459 - -
Stsc241668g00015 491 ProSitePatterns Protein kinases ATP-binding region signature. 179 201 IPR017441 GO:0005524
Stsc241668g00015 491 FunFam Probable serine/threonine-protein kinase At1g01540 153 248 - -
Stsc241668g00015 491 ProSiteProfiles Protein kinase domain profile. 173 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241668g00015 491 MobiDBLite consensus disorder prediction 115 137 - -
Stsc241668g00015 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Stsc241668g00015 491 Gene3D Phosphorylase Kinase; domain 1 141 248 - -
Stsc241668g00015 491 SMART serkin_6 173 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241668g00015 491 CDD STKc_IRAK 179 445 - -
Stsc241668g00015 491 SUPERFAMILY Protein kinase-like (PK-like) 150 445 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241668g00015 Stsc-Chr241668 86698 90132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241668g00015 121 447 Trihelix Transcription Factor Family AT1G70460 47.289 1.15e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Stsc241668g00015 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241668g00015 - - gmx:100305442 632.098