Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241668g00006 ATGATTGCCGATTTCCCATTGCTGCTCAGATACAATCCTGACATCCTTCGGCCTAACTATGTTTATTTGTGGCGAAACATTATCCGGCCTTTGCGAGATATCATTGAATTTCCAAGGTTTTTTTGCTATTCTATTGAAAGGCGAATTATCCCAAGACACAAGGTTCTTGTGGAGAATCAGCTTAATATTAAGTTGAGATACATGTTGGCTAGCAGTGATGTAGAATTCAAGAAACTGGTCAATGCTCTTGTCACTTGTCAGAAAGGGTGA 270 0.3963 MIADFPLLLRYNPDILRPNYVYLWRNIIRPLRDIIEFPRFFCYSIERRIIPRHKVLVENQLNIKLRYMLASSDVEFKKLVNALVTCQKG 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241668g00006 89 PANTHER CGI-12 PROTEIN-RELATED 1 81 IPR003690 GO:0003690|GO:0006355
Stsc241668g00006 89 Pfam mTERF 1 77 IPR003690 GO:0003690|GO:0006355
Stsc241668g00006 89 Gene3D Transcription termination factor 3, mitochondrial 1 84 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241668g00006 Stsc-Chr241668 53983 54356 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc241668g00006 mTERF 8.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241668g00006 K15031 - cave:132184212 131.339