Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241668g00001 ATGGCTTCAAGCACTCTTAGCAAACAAAAGAATCCTTGTTCATCATCATCAACAACATGGACAGCAAAAGAAAATAAGGTGTTTGAGAAGGCACTTGCGAAATTTGATAAGGATACAGCAGATAGGTGGCAGAATGTTGCAAAAGCAGTTGGTGGAAATAAATCTGCTGATGAAGTTAAGAGACACTATGAAATCCTCTTAGAAGATCTCAGACACATTGAGTCAGGCCATGTTCCCATTCCTAACTACAAATCCACACCACCACCAACTATGACTGATGAAGAACAGAGGCTTTTGAAGTATCTTAAGCTGAATTAA 318 0.3899 MASSTLSKQKNPCSSSSTTWTAKENKVFEKALAKFDKDTADRWQNVAKAVGGNKSADEVKRHYEILLEDLRHIESGHVPIPNYKSTPPPTMTDEEQRLLKYLKLN 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241668g00001 105 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 89 IPR044636 GO:0003700
Stsc241668g00001 105 FunFam Transcription factor SRM1 13 80 - -
Stsc241668g00001 105 ProSiteProfiles SANT domain profile. 15 71 IPR017884 -
Stsc241668g00001 105 MobiDBLite consensus disorder prediction 1 20 - -
Stsc241668g00001 105 SMART sant 16 69 IPR001005 -
Stsc241668g00001 105 ProSiteProfiles Myb-like domain profile. 20 67 IPR001005 -
Stsc241668g00001 105 Pfam Myb-like DNA-binding domain 19 63 IPR001005 -
Stsc241668g00001 105 Gene3D - 12 80 - -
Stsc241668g00001 105 SUPERFAMILY Homeodomain-like 18 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241668g00001 Stsc-Chr241668 10964 13374 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc241668g00001 Myb_DNA-binding 9.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241668g00001 - - ahf:112788989 169.088