Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241667g00016 ATGACGAATCATGAGAGTAATGTGGTAGGTCCTGATGTGATGCTAATTGCATTAGCAGCATCCATCTCCAACACCCCACTCATCCCAAATGCAGCTGTTCTTGGAGAGCTTCTTCTCCATCATCATCATCATCATCATGACACTTCTAAAATTAACAATTTGATTGATTCAATGAGAGCTTCTTCTCCAACTCGCACCAGATCATCATCCTTAGCTAACAATAACAATAACAATGCTTCCGATAACCAAGACACCATTAATTCTTGGATGCTTTATCATCCTTCGGCGCTCAACATGTTCGATCAGATAGTATATAACATGAAAGGGAAGAAGATTGTAACCTTTCTTGACTACGATGGAACTCTTTCCCCAATTGTTGCGGATCCTGATAAGGCTTTCATGACTAAAAAGATGAGAGGCACCCTCAAGGACATAGCAAGGCATTTCCCCACCGCAATCGTCACCGGAAGGTGCAGGGACAAGGTGTATAGCTTTGTGAAATTGGCAGAACTTTATTACGCTGGAAGCCATGGCATGGACATAAAGGGGCCAACAAAAAGCAGAAATCCAAATAAAGGAAATGATAAAGCACTTCTTTGCCAACCTGCAAGTAAATTCCTACCTATGATAGAAGAGGTTTACAAGATCTTATTAGAAAAAACAAAATGTGTCCCAGGGGCTAAGGTAGAGAACAACAAGTTCTGTTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGTGTTGGGCTGCATTGGCTGAACAAGTTAGATTGGTGCTGAATGAGTACCCAAAATTGAAGCTAACACAAGGAAGAAAAGTCCTAGAGATCCGTCCTACCATCAAATGGGACAAGGGCAAAGCTCTTCAATTCTTGCTCGAATCACTTGGTTATGAGAATTCAAATGACGTTTTCCCAATCTATATTGGCGATGATCGTACAGACGAGGATGCTTTTAAGGTTTTGCGCAATAGAGGCCAAGGGATTGGGATTCTTGTTTCTAGAGTTCCAAAAGACACAGAAGCTTCATACACCTTGAAAGATCCAGTAGAGGCAAGTTCTAAAATATTCTTATTATTATTATTATTTAATTTTATAAGAAAATATTTTTTGGTATTGTTTATCTGA 1125 0.3991 MTNHESNVVGPDVMLIALAASISNTPLIPNAAVLGELLLHHHHHHHDTSKINNLIDSMRASSPTRTRSSSLANNNNNNASDNQDTINSWMLYHPSALNMFDQIVYNMKGKKIVTFLDYDGTLSPIVADPDKAFMTKKMRGTLKDIARHFPTAIVTGRCRDKVYSFVKLAELYYAGSHGMDIKGPTKSRNPNKGNDKALLCQPASKFLPMIEEVYKILLEKTKCVPGAKVENNKFCLSVHFRCVDEKCWAALAEQVRLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKALQFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRNRGQGIGILVSRVPKDTEASYTLKDPVEASSKIFLLLLLFNFIRKYFLVLFI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241667g00016 374 FunFam Trehalose 6-phosphate phosphatase 209 364 - -
Stsc241667g00016 374 Gene3D - 115 345 IPR023214 -
Stsc241667g00016 374 SUPERFAMILY HAD-like 115 361 IPR036412 -
Stsc241667g00016 374 Pfam Trehalose-phosphatase 115 348 IPR003337 GO:0003824|GO:0005992
Stsc241667g00016 374 CDD HAD_TPP 115 348 - -
Stsc241667g00016 374 FunFam Trehalose 6-phosphate phosphatase 203 279 - -
Stsc241667g00016 374 NCBIfam HAD-IIB family hydrolase 115 323 IPR006379 -
Stsc241667g00016 374 Gene3D - 194 279 - -
Stsc241667g00016 374 MobiDBLite consensus disorder prediction 60 80 - -
Stsc241667g00016 374 NCBIfam trehalose-phosphatase 109 353 IPR003337 GO:0003824|GO:0005992
Stsc241667g00016 374 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 39 356 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241667g00016 Stsc-Chr241667 148452 150745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241667g00016 101 319 Trehalose Biosynthesis Gene Families AT1G23870 24.348 3.92e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241667g00016 K01087 - gmx:100788641 484.567