Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241667g00015 ATGACGAATCATGAGAGTAATGTGGTAGGTCCTGATGTGATGCTAATTGCATTAGCAGCATCCATCTCCAACACCCCACTCATCCCAAATGCAGCTGTTCTTGGAGAGCTTCTTCTCCATCATCATCATCATCATCATGACACTTCTAAAATTAACAATTTGATTGATTCAATGAGAGCTTCTTCTCCAACTCGCACCAGATCATCATCCTTAGCTAACAATAACAATAACAATGCTTCCGATAACCAAGACACCATTAATTCTTGGATGCTTTATCATCCTTCGGCGCTCAACATGTTCGATCAGATAGTATATAACATGAAAGGGAAGAAGATTGTAACCTTTCTTGACTACGATGGAACTCTTTCCCCAATTGTTGCGGATCCTGATAAGGCTTTCATGACTAAAAAGATGAGAGGCACCCTCAAGGACATAGCAAGGCATTTCCCCACCGCAATCGTCACCGGAAGGTGCAGGGACAAGGTGTATAGCTTTGTGAAATTGGCAGAACTTTATTACGCTGGAAGCCATGGCATGGACATAAAGGGGCCAACAAAAAGCAGAAATCCAAATAAAGGAAATGATAAAGCACTTCTTTGCCAACCTGCAAGTAAATTCCTACCTATGATAGAAGAGGTTTACAAGATCTTATTAGAAAAAACAAAATGTGTCCCAGGGGCTAAGGTAGAGAACAACAAGTTCTGTTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGTGTTGGGCTGCATTGGCTGAACAAGTTAGATTGGTGCTGAATGAGTACCCAAAATTGAAGCTAACACAAGGAAGAAAAGTCCTAGAGATCCGTCCTACCATCAAATGGGACAAGGGCAAAGCTCTTCAATTCTTGCTCGAATCACTTGGTTATGAGAATTCAAATGACGTTTTCCCAATCTATATTGGCGATGATCGTACAGACGAGGATGCTTTTAAGGTTTTGCGCAATAGAGGCCAAGGGATTGGGATTCTTGTTTCTAGAGTTCCAAAAGACACAGAAGCTTCATACACCTTGAAAGATCCAGTAGAGGTTGAGCAATTTTTGCGGCGTCTAGTGGAATGGAAAAGATCGAGTAACCAGTAA 1104 0.4176 MTNHESNVVGPDVMLIALAASISNTPLIPNAAVLGELLLHHHHHHHDTSKINNLIDSMRASSPTRTRSSSLANNNNNNASDNQDTINSWMLYHPSALNMFDQIVYNMKGKKIVTFLDYDGTLSPIVADPDKAFMTKKMRGTLKDIARHFPTAIVTGRCRDKVYSFVKLAELYYAGSHGMDIKGPTKSRNPNKGNDKALLCQPASKFLPMIEEVYKILLEKTKCVPGAKVENNKFCLSVHFRCVDEKCWAALAEQVRLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKALQFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRNRGQGIGILVSRVPKDTEASYTLKDPVEVEQFLRRLVEWKRSSNQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241667g00015 367 NCBIfam HAD-IIB family hydrolase 115 323 IPR006379 -
Stsc241667g00015 367 Pfam Trehalose-phosphatase 115 348 IPR003337 GO:0003824|GO:0005992
Stsc241667g00015 367 CDD HAD_TPP 115 351 - -
Stsc241667g00015 367 NCBIfam trehalose-phosphatase 109 359 IPR003337 GO:0003824|GO:0005992
Stsc241667g00015 367 SUPERFAMILY HAD-like 115 361 IPR036412 -
Stsc241667g00015 367 Coils Coil 364 367 - -
Stsc241667g00015 367 FunFam Trehalose 6-phosphate phosphatase 209 367 - -
Stsc241667g00015 367 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 39 366 IPR044651 GO:0004805|GO:0005992
Stsc241667g00015 367 Gene3D - 227 367 IPR023214 -
Stsc241667g00015 367 Gene3D - 112 210 IPR023214 -
Stsc241667g00015 367 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241667g00015 Stsc-Chr241667 148433 150745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241667g00015 108 358 Trehalose Biosynthesis Gene Families AT1G70290 26.103 5.24e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241667g00015 K01087 - gmx:100788641 511.916