Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241667g00003 ATGGATGAGAGAAGCTTTTCAATAACTTCATCACAAGGCCAACAGCAAGCACCGACATATGTGCACAAAGTGGGAATTCCTCCACGACAGAACCTGTTCCAAGAATTCAAGGCCACCATCAAGGAGACATTCTTTGCTGATGATCCTCTAAGATCCTTCAAGGACCAACCGAAATCGCGAAAGTTCATCCTCGGTGTTGAGGCCTTGTTCCCCATACTCAACTGGGGCAGAAATTACAACCTTAAGAAGTTTAGAGGAGATCTTATATCTGGCCTAACTATTGCAAGTCTTTGCATTCCCCAGGATATTGGATATGCGAATCTTGCAAAGTTGCAACCCCAATATGGATTGTACTCAAGCTTTGTTCCACCACTAATCTATGCTGTCATGGGTAGCTCCCGTGATATCGCAATAGGACCGGTGGCAGTGGTTTCTCTCTTGTTGGGAACCTCACTTAGTAATGAGATTGATCCTACTACAAATCCAGAGGAATATCTGAGACTTGCCTTCACAGCCACTTTTTTTGCTGGGATTACTCAAGCAACACTTGGGATTTTCAGATTGGGATTCTTGATTGACTTCCTATCCCATGCGGCTATTGTTGGTTTTATGGGGGGTGCTGCCATCACCATTGCCCTTCAACAACTTAAGGGCTTTCTTGGGATTGAAACAAAAAATTTCACAAAAAAAACTGATATTGTCAATGTTATGCATTCTGTAGTCTCAACAGCCCATCATGGATGGAATTGGCAAACTATACTCATCGGAGCAAGCTTCTTGGGTTTTCTTCTATTTGCCAAATTCATTGGAAAGAAGAACAAAAAGTTCTTCTGGGTGCCAGCAATTGCCCCATTGATATGTGTTATCTTGTCTACTTTTTTTGTATTCATAACACGTGCAGATAAGCATGGAGTAGAAATTGTTAACCACATTAAAAAGGGGATCAATCCTTCATCTGTTAAACAAATATATTTCAACGGTGACTACCTTGGGAAAGGTTTTAGAATTGGTGTCATGGCAGGCATGATAGCACTAACTGAAGCTGTAGCAATTGGAAGAACATTTGCATCTGTGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTAGCATTAGGAGCTATGAATGTCGTAGGTTCAATGACTTCATGTTATGTTGCAACTGGTTCTTTCTCTAGGTCAGCAGTAAATTTCATGGCTGGATGTGAAACTGCAGTATCTAATATTGTGATGTCTGTAGTTGTGTTCTTAACCCTGGAATTCATCACTCACCTTTTCAAGTACACTCCGAAGGCCATTCTTTCTTCCATCATCATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAGCTATTTTGATTTGGAAGATTGATAAATTTGATTTTGTCGCTTGCATGGGAGCATTCTTTGGTGTTGTTTTTGCCACTGTTGAGATTGGACTTCTAATTGCTGTTTCTATATCCTTTGCAAAGATTCTACTACAAGTCACAAGGCCTAGAACTTGTATTTTGGGGAAGATTCCTAGGACAACTGTCTATAGAAACATCCATCAATACCCCGAAGCTACTAAGGTTCCAGGTGTACTTATTGTGAGAGTTGATTCTGCTATATATTTTTCCAACTCCAATTATGTCAAAGAAAGGATACTAAGATGGTTGATGGATGAAGAAGAACAAGGTAAAGGAGACTACCAAACAAGAATCCAGTTTTTGATTGTTGAAATGTCACCCGTTACTGACATAGACACCAGTGGCATCCATGCCCTTGAAGAGTTACACAGAAGCCTTGAGAAGAGAGATATTGAGCTTGTTCTGGCAAATCCTGGCCCAGTAGTGATTGACAAGGTTTACACATCAAAGCTTGCGAACATGATTGGTGAGAACAAGATCTTCCTCACAGTTGCAGAGGCAGTTGCATATTGTTCTCCAAAGCTATCTGAAGATCCATGA 1950 0.4082 MDERSFSITSSQGQQQAPTYVHKVGIPPRQNLFQEFKATIKETFFADDPLRSFKDQPKSRKFILGVEALFPILNWGRNYNLKKFRGDLISGLTIASLCIPQDIGYANLAKLQPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTSLSNEIDPTTNPEEYLRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIETKNFTKKTDIVNVMHSVVSTAHHGWNWQTILIGASFLGFLLFAKFIGKKNKKFFWVPAIAPLICVILSTFFVFITRADKHGVEIVNHIKKGINPSSVKQIYFNGDYLGKGFRIGVMAGMIALTEAVAIGRTFASVKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIVMSVVVFLTLEFITHLFKYTPKAILSSIIISAVINLVDYQAAILIWKIDKFDFVACMGAFFGVVFATVEIGLLIAVSISFAKILLQVTRPRTCILGKIPRTTVYRNIHQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLMDEEEQGKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELHRSLEKRDIELVLANPGPVVIDKVYTSKLANMIGENKIFLTVAEAVAYCSPKLSEDP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241667g00003 649 PANTHER SULFATE TRANSPORTER 30 642 IPR001902 GO:0016020|GO:0055085
Stsc241667g00003 649 FunFam Sulfate transporter 31 498 644 - -
Stsc241667g00003 649 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Stsc241667g00003 649 Gene3D STAS domain 498 644 IPR036513 -
Stsc241667g00003 649 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Stsc241667g00003 649 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Stsc241667g00003 649 SUPERFAMILY SpoIIaa-like 520 642 IPR036513 -
Stsc241667g00003 649 Pfam Sulfate permease family 84 466 IPR011547 GO:0016020
Stsc241667g00003 649 NCBIfam sulfate permease 71 637 IPR001902 GO:0016020|GO:0055085
Stsc241667g00003 649 Pfam STAS domain 519 637 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241667g00003 Stsc-Chr241667 27791 31494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241667g00003 2 648 Inorganic Solute Cotransporters AT1G22150 76.080 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241667g00003 K17470 - gmx:100797668 1082.78