Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241667g00001 ATGTCTTTTGACTCTTGTGGTGAAGCTCATGCATTTTATAAGAACTATGCTTCCAAAGTGGGTTTTTTGGTCAAAATTAAGACCACTAATTATGTTAAGAATGTTGATGGAGAAAAGATAATTGCCAATCAATCTATTCTTTGTAACAAGCATGGCAATCGGAGTTCTCGTGTACTTGCTCCCATCAGATCTAAGAAGATTTCATCAGAAAAGTGCAAGGCTAGGGTTTATGTCAAGTTGGACAAAGAAAAAGGGACTTGGTTTTATGCAATATTTGAGGCAAAGCACACACATGCTTATTCTCCTCAAAAGTCACTTCATTACCATGAGTATAGGGAATTGAACATGCATGCAAAGTGTGTGATACAAGATAATGATGAAGCCGGGATAAGACCTAACAAGACGTATCTTGCACTTTGCAATGAA 426 0.3709 MSFDSCGEAHAFYKNYASKVGFLVKIKTTNYVKNVDGEKIIANQSILCNKHGNRSSRVLAPIRSKKISSEKCKARVYVKLDKEKGTWFYAIFEAKHTHAYSPQKSLHYHEYRELNMHAKCVIQDNDEAGIRPNKTYLALCNE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241667g00001 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 139 - -
Stsc241667g00001 142 Pfam FAR1 DNA-binding domain 12 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241667g00001 Stsc-Chr241667 3275 3700 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241667g00001 FAR1 1.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241667g00001 - - ahf:112763010 167.933