Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241666g00043 ATGATTTTTGAAATCATTGATCTTACACGAGAATCTCCTCCTCGTCCTCCTCCTCTTCCACCACCATCAAGAAGATCTGTTTCAGAAGAACCAACAATCCTTAACTTTGCTAATGGTACTACCACTATTGCTACTAATGGTGTGTGGCCATCTTCAATGCATATTTATGATCCATCTCTTCATCCTTCACATCGTTATTATCATCATCAGCCGCTGCAAGCTTCTAATGAAAATAATAATAATAATAGTAGCAGCTTCTTCTTTCAACCTTACATGAATGCTAATCATCTTCAACATCAACATCAAGTTGCTGCTACTGCTGTTACTACAACACATGAACCAGTTTCTCAATCTCAACAAACTGCATTCATGTTTTCTCATCCTAATAATAACTGTCTCCCTGCTGATGATTGGACTCTCGAAGAGCAAGAGTTATTTATGATGGGACTAAGAAAGTATGGAAGAGGACGTTGGAATGAAATAGCCGGCCATTATTTGAATAACAAGACACCTCAACAAATTCAGAATTATGCTGATAATTTCTTCTACGATAGCTTTAGAGGAAGAAGAAACTCATCATCATCAATATACTCTCCTTCTTCTACTGCGAGTTTCAGGACTTATTCTTCAGAGAACAATAACAATAATGATGAGCCAATTAAAGAAACACTCATGCTTTTTCCTGAGAAGAAAGAGAATGATCATCGCGAAGTGTTTACAAGAGAATTTGCTACTACTATTACCAATACCATAGCTAATAATAACTATGCATATGGATTATTGTTTGGAATAACGCCAACAACAACGACAATTGGTGAAAGCTCTTCCATAGGTGATAGTGGTAACTATCATGAAGAAATTGATTTGGAGTTGCGTTTGGGTGATAATTGA 891 0.3648 MIFEIIDLTRESPPRPPPLPPPSRRSVSEEPTILNFANGTTTIATNGVWPSSMHIYDPSLHPSHRYYHHQPLQASNENNNNNSSSFFFQPYMNANHLQHQHQVAATAVTTTHEPVSQSQQTAFMFSHPNNNCLPADDWTLEEQELFMMGLRKYGRGRWNEIAGHYLNNKTPQQIQNYADNFFYDSFRGRRNSSSSIYSPSSTASFRTYSSENNNNNDEPIKETLMLFPEKKENDHREVFTREFATTITNTIANNNYAYGLLFGITPTTTTIGESSSIGDSGNYHEEIDLELRLGDN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241666g00043 296 Gene3D - 136 185 - -
Stsc241666g00043 296 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 137 230 IPR043363 -
Stsc241666g00043 296 MobiDBLite consensus disorder prediction 11 25 - -
Stsc241666g00043 296 SUPERFAMILY Homeodomain-like 135 186 IPR009057 -
Stsc241666g00043 296 ProSiteProfiles SANT domain profile. 133 186 IPR017884 -
Stsc241666g00043 296 ProSiteProfiles Myb-like domain profile. 138 182 IPR001005 -
Stsc241666g00043 296 MobiDBLite consensus disorder prediction 6 29 - -
Stsc241666g00043 296 CDD SANT 138 182 IPR001005 -
Stsc241666g00043 296 MobiDBLite consensus disorder prediction 192 219 - -
Stsc241666g00043 296 Pfam Myb-like DNA-binding domain 137 178 IPR001005 -
Stsc241666g00043 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 138 186 IPR017930 -
Stsc241666g00043 296 SMART sant 134 184 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241666g00043 Stsc-Chr241666 304452 306219 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc241666g00043 Myb_DNA-binding 1.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241666g00043 - - adu:107478694 213.772