Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241666g00033 ATGTCTGATTCTGATAATTCTTCTGCATCTTGGGGTGATGACAAGAAGAGTGATACAGATATCCTTAGAACAAAGAAAAAGGATCTTGCTAATCCTGCGGAGCTAAATTCGCCAGAGTTGCTACTCAAGATATTTAGGACAGATTATTCTCTTCGATCTGTTGGTCCTAGTTCTGGAGTAGTTTTGTGGACTATGACCGTATCTGAATTCGAGGCTGTATTATTATGCCAGCATACTTCATTTGATGCCGATGGTGAGTATGTTTCTGACAGTGGGCTCAGTTTTGCGATGCCATATCCATGTCAAGAGATCCAACCAGTCTTTCGCTTGCGAAAGAATTTTATACTAGAACCGTCAATCACTGAAAGGTTGCCTGGTTCTGATCATGAAAACAATATGCCTTTGATGCCTGCATCAGATTTGATGCTTCCTTCACTAGAGAATTTTGAAAACTTAAATGTTGATGATGGTAATAAGATGCTTCCTGTGCCAATACCAAATTCTTTGCCTTCGCCAGAACCAAAAATTGTCTATCCAAGCCGAATGCATGAATGGTCAACACCGTTACGTTTTATGATGCTAATGCTTTTGGGCTTTGTCCTCTATAATGTAGTTGTTAAAAGTAAAGATATGACAAAGGACCAAAACCAGTCTGAATCAAAGATCTCATCTGCTAAGAAAAAGAAGCCACGTAAATCAGGAAAGAACAATGTAGCAGTTGACAAAAAGGAAAAGCGTCTGTCCTCCGAAGATGAGGATGTGCTGATGCGAAAGGATCTCGATGTAGAAGCGGGCACATGGATGCAATTTAACCAAGTTGATCAAGGTGTTGATGGACGCAGGGTTGGTAAACTGCTTGTGTCATATAAAGAAATTGCTAAGGGAAGCAACGGTACCATCGTCTTTGAGGGAATATATGAAGGTCGGGCAGTTGCTGTCAAGCGTTTGGTCAAGACTCATCATGATGTAGCCTTTAAAGAAATCCAAAATCTCATTGTATCTGATCATCACCCAAACATTGTTCGATGGCATGGGGTAGAATATGATCAAGATTTTGTTTATCTTGCTCTAGAAAGATGTACATGCAGCTTGGATGATTTAATTCAAATTTATTCGGATATATCAGATAACCCTCTGTTTAGGAAGAGCCAATCTTTCAAATCTTCTATCAAGGCCCAAATTGATACAGGGAAGGATAATATGCATGGTCTGTGGAAAGCCAATGGCTATCCATCACCTCTATTACTGAAATTGATGAGGGATGTTGTTTCTGGGGTGGTTCATTTGCATGAACTAGGCATTATACATAGAGATTTGAAACCCCAAAATGTTTTGATAATCAAGGAAAGATCCTTGTGTGCAAAGCTTTCTGATATGGGCATCAGCAAACGTCTCCCTGAAGATATGTCTTCTTTGGGTCATAATGCTACTGGGGCTGGCAGCTCAGGTTGGCAAGCACCAGAACAACTTGGTCAAGGACGCCAAACACGGGCTGTGGATTTATTTAGCTTAGGTTGTGTCCTCTTTTTCTGCATGACTGGGGGGAGACATCCGTTTGGAGAACGGCTTGAACGCGATGTTAATATTGTTAAAAACAGAAAGGATCTTTTCTTAGTGGAGTTCATTCCTGAAGCAGAAAACCTAGTTTCTAGTTTACTGAACCCTAACCCTGATATAAGGCCGAAGGCAATTGAAGTATTACACCATCCATTTTTTTGGAGTCCAGAAATGAGACTCTCATTTTTACGCGACACCAGTGATAGGGTGGAACTAGAAGACAGGGAGACTAATTCTGTTCTTCTGAACGCATTAGAAAGCATTGCTACAGTTGCTTTAGGTGTAAAATGGGACGAAAAGTTGGAACCAGCCTTTCTTAATAACATCGGTCGATATCGACGGTACAAGTATGACAGTGTTCGAGACTTGTTGCGGGTCATGAGGAACAAGCTAAATCATTATAGAGAGTTGCCCCAAGAAATCCAGGAACTTGTGGGATCTGTTCCAGAAGGATTCAATGAATACTTTGCAAGCCGATTCCCGAGGCTATTAATTGAAGTGTATAAAGTTATATGCAAGCATTGCAAAGAAGAACAATGTTTTGAAAGGTATTTTAAGAAACTTGATTAG 2127 0.4043 MSDSDNSSASWGDDKKSDTDILRTKKKDLANPAELNSPELLLKIFRTDYSLRSVGPSSGVVLWTMTVSEFEAVLLCQHTSFDADGEYVSDSGLSFAMPYPCQEIQPVFRLRKNFILEPSITERLPGSDHENNMPLMPASDLMLPSLENFENLNVDDGNKMLPVPIPNSLPSPEPKIVYPSRMHEWSTPLRFMMLMLLGFVLYNVVVKSKDMTKDQNQSESKISSAKKKKPRKSGKNNVAVDKKEKRLSSEDEDVLMRKDLDVEAGTWMQFNQVDQGVDGRRVGKLLVSYKEIAKGSNGTIVFEGIYEGRAVAVKRLVKTHHDVAFKEIQNLIVSDHHPNIVRWHGVEYDQDFVYLALERCTCSLDDLIQIYSDISDNPLFRKSQSFKSSIKAQIDTGKDNMHGLWKANGYPSPLLLKLMRDVVSGVVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLPEDMSSLGHNATGAGSSGWQAPEQLGQGRQTRAVDLFSLGCVLFFCMTGGRHPFGERLERDVNIVKNRKDLFLVEFIPEAENLVSSLLNPNPDIRPKAIEVLHHPFFWSPEMRLSFLRDTSDRVELEDRETNSVLLNALESIATVALGVKWDEKLEPAFLNNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGSVPEGFNEYFASRFPRLLIEVYKVICKHCKEEQCFERYFKKLD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241666g00033 708 MobiDBLite consensus disorder prediction 212 244 - -
Stsc241666g00033 708 Gene3D KEN domain 576 707 IPR038357 -
Stsc241666g00033 708 ProSiteProfiles Protein kinase domain profile. 286 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241666g00033 708 Pfam Protein kinase domain 289 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241666g00033 708 CDD RNase_Ire1 576 704 - -
Stsc241666g00033 708 Gene3D Transferase(Phosphotransferase) domain 1 399 574 - -
Stsc241666g00033 708 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 576 708 - -
Stsc241666g00033 708 SUPERFAMILY Protein kinase-like (PK-like) 288 590 IPR011009 -
Stsc241666g00033 708 ProSiteProfiles KEN domain profile. 575 706 IPR010513 GO:0004540|GO:0006397
Stsc241666g00033 708 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 278 358 - -
Stsc241666g00033 708 Pfam Ribonuclease 2-5A 578 704 IPR010513 GO:0004540|GO:0006397
Stsc241666g00033 708 SMART serkin_6 286 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241666g00033 708 SMART PGNneu 637 691 - -
Stsc241666g00033 708 Gene3D Phosphorylase Kinase; domain 1 273 358 - -
Stsc241666g00033 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Stsc241666g00033 708 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 397 574 - -
Stsc241666g00033 708 PANTHER IRE1-RELATED 41 705 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241666g00033 Stsc-Chr241666 192938 196684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241666g00033 312 571 MAP Kinase Kinase Kinase AT3G06030 26.515 2.45e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Stsc241666g00033 Pkinase 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241666g00033 K08852 - gmx:100788389 994.571