Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241666g00026 ATGGCCAGGAAAGTTCATACCCATAAGAGACATGATGAAGGTCTGCATAATTCTCAACATAACTTGAAGCTGCAAGAAGAAGCATCTCAGATGCACCATTCAGAAGCTAAATCACATTATTCTACTAAAGGATCAAAGAACAATGGTTATTCAAATGTGACTTCAGTGAGAGAAATGATGACTGATGAAAAGTTATCTAAACAATCATGCAACCGAAATATGGCGCCGAGCATTGTGGCGAGGTTGATGGGATTAGATATGATGCCATTACAAGATAAGAGAATAACTGATCAAAATATGGAGGAGAAGAAGATCTTTGAAAAGAGAATTAGTAGAAGCGGTTCGGTTGATCGAAGTTCCTCCAACTCTAGTTCTTCCAGAAAGACAGATATTGATTCATTTTACCAAGACATTGATGATGATGGATTGGGAAAAGAATTAACAAATCCAATGCTGCTTCGGCCGCATCCGCAGGAAGAAGAACTCAAGAAATTCAAGGGAGAATTCGAAGCATATCAAGCATCAAGGCTTAAGGAGTATCCAAAATTCAATGAAAGAAGAACAAAGAGTGTTCAAGAAATGGTGCCTTGTAATGCAAGTTTCAAGACTAAGACAAAGAGAAAGGGAAAGGTAGCAGAAAAAGGAGCTTTTCCTTCAACAATGAAGAATTCTAGAAGCAGATTTGATGGTAATTCACTTTCAACATCTCAGATAACTGTCTTGAAGCCTTGTTTCTACCATGGAGAAGAGAGTTTGAAAACAAGTACTAGTATAGAAGATTTTCTTGAGCAAGTTAAAGTAAAGTTGCTAAGTGAAATCCAAGGGAGAAAAAGTACTTTCGAAAAGTGTTCTTCGGTTCGAGGAAGCGAAAATGAGAGACATAGATCAAGTGAGGTCACAAATTTACTCCATTCGCAATCGGCGAGATCTTACAGAAGTGAAATCGAGTTCAAGGGACAGAGTTCCCCTGAATCTATCAGCAGAGGAACAAGGAGATCAGAAAGACTAAGAAACTTTGTGAATTCTGAAAATCTGAATGATGATGCATTGCTTCAGAAGGAGTTATCTCCAATGATGATTCTTGAAAGATCCTTTTCTGCTCCTCTATCAGGAAAATATTGCCGGATTCCGATCCGCGATCATGTTTGGGAGAAGCTTGAGGATCTTGAAAGGATGCTACCTTTTGATGCTAAGAAGAAGAAGAACAACAAAGATAGATTTGGTATTAAAGAAAAAGTTTCAAATCTTAAACAAAAGTTTGGTCTAAGAGGGAAGATTTTTGCTAAAAGGATTCATTCAATGGTTGAAACTCCAAATAGCATTGAAGATGGATTCATGGTGAGAGATATTAGAAGTGGACCAACTGTTCTCATGAAACATGGAAGAAGCCATGATAACTTCACTGAGGTACCTCCTAGTCCTGAATCTTTGTGTAGCAGTGTTCATGAAGAACTTTGGTGGCAGAGCCCATTTTCAACTCCAGGTGAATCTTCATCAGTAGATGATAGCATTATGCCACAGGTTTATGGATATATCACCTCTGATTTAAATGAGCTAAGTAAGCAACTAAGCCAACTTGAGTTTGACAGCCCAGAAGAACTTGAAACGAAACCGAAGTCTTCTGAGTACGAATTAGACCGGCTACTCGATCCGGCGGAGTCTTACATAAGAGATCTTCTTGTTGCCTCCGGACTTTACTTTGAATCATGGGACAAATACCTACTAAGAGAGGACACATTGACAAACCCCATAGACAACTCAATTTTTGAAGAAGTGGAAGAATCTCACAAGAATAAATGTTTGGTCAATGAAAACATTGATAACAAGTTAGATCACAAAATCTTACTTGATTTGTTAAATGAGGCACTTTCCATTGTTCTTGGACAACCTTTGACAATGTCTAGATTCAGAAGGAAACTCAACAACAATAATTCATGCGTAATACAGAAGACTCCACCATGTGGGAAGGAACTATTGAAGCTAGTATGGGACATTATCCATGTTTCTTTGTATCCTCCAAAAATATCTAACACATGTTCTTGTTCATTTATTAGTTTGGTGAAACAAGATTTTGGATCCATATTATTGTATGGACTAATGAATGATGAGATCAATGTGTTAGAAATGGAGATGGCACGTTTAATTAGTGATGATTTGGTTGAAGAACTCATAAAGGATATGATAGATAATTTCAAATGTAAGTGGTAA 2208 0.3741 MARKVHTHKRHDEGLHNSQHNLKLQEEASQMHHSEAKSHYSTKGSKNNGYSNVTSVREMMTDEKLSKQSCNRNMAPSIVARLMGLDMMPLQDKRITDQNMEEKKIFEKRISRSGSVDRSSSNSSSSRKTDIDSFYQDIDDDGLGKELTNPMLLRPHPQEEELKKFKGEFEAYQASRLKEYPKFNERRTKSVQEMVPCNASFKTKTKRKGKVAEKGAFPSTMKNSRSRFDGNSLSTSQITVLKPCFYHGEESLKTSTSIEDFLEQVKVKLLSEIQGRKSTFEKCSSVRGSENERHRSSEVTNLLHSQSARSYRSEIEFKGQSSPESISRGTRRSERLRNFVNSENLNDDALLQKELSPMMILERSFSAPLSGKYCRIPIRDHVWEKLEDLERMLPFDAKKKKNNKDRFGIKEKVSNLKQKFGLRGKIFAKRIHSMVETPNSIEDGFMVRDIRSGPTVLMKHGRSHDNFTEVPPSPESLCSSVHEELWWQSPFSTPGESSSVDDSIMPQVYGYITSDLNELSKQLSQLEFDSPEELETKPKSSEYELDRLLDPAESYIRDLLVASGLYFESWDKYLLREDTLTNPIDNSIFEEVEESHKNKCLVNENIDNKLDHKILLDLLNEALSIVLGQPLTMSRFRRKLNNNNSCVIQKTPPCGKELLKLVWDIIHVSLYPPKISNTCSCSFISLVKQDFGSILLYGLMNDEINVLEMEMARLISDDLVEELIKDMIDNFKCKW 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241666g00026 735 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 345 727 - -
Stsc241666g00026 735 MobiDBLite consensus disorder prediction 28 51 - -
Stsc241666g00026 735 MobiDBLite consensus disorder prediction 313 332 - -
Stsc241666g00026 735 MobiDBLite consensus disorder prediction 313 327 - -
Stsc241666g00026 735 Pfam Domain of unknown function (DUF4378) 554 722 IPR025486 -
Stsc241666g00026 735 Pfam DUF761-associated sequence motif 75 89 IPR032795 -
Stsc241666g00026 735 MobiDBLite consensus disorder prediction 106 136 - -
Stsc241666g00026 735 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241666g00026 Stsc-Chr241666 138652 142077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241666g00026 63 727 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 33.154 2.51e-76 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241666g00026 - - aip:107621743 919.457