Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241666g00021 ATGAAGAACACCTTCCTCACCACCCTCTTAGTCTTCAAGAACACCATTAGAGAAGAGTTGATCAGGAGTGTGCATGTGTACCAAGTGAAGGATGGGAAAGTAAGGGAAGTTGAAAGAGAGTTTGTGTTCTCAGAGAGTGGCTCCTATGGGGAAATGAGGTCCACACCAATCCTCAGATTGCAGAAGAAGCTTTCTGTTGCTCAAGTTTCTGAAGGGTACCAAAATGGAGTGTGGCTTTGTATCTTCTCCTTTCATAGAGATCACAACCCTCAATTTTCCACCGTTCCAAACTTGCTTCTGCTCTCTAGAAACCCGAAGCTTCGGACAATCCCAACCTTGCTCAAAGACCTTCGTGTGATATACAAATCCGAAAAAGACAACGATGTTCTACCAGACACCACGGTGGAAGAACGCCAAGGAAACAACAGAGAGTCCCAACCATCGAGGAAAGTGGTTCCTGTGTTAATTCAAGACCTGAATTTTCTTCCTTATGAAGCTGACATCTCCGAATCACCCAACAACAAGCTAGATGTTCAAGCCTTGCCAGTTGCAGATTCTGCAGAGAAGAAAAAGCGTGCAACTAGTGACCGTGTAGCAAAAATAACGTTATCAGAGTTAGTCAAGTATTTTGATATACCGATTGTAGAAGCATCGAGAAGGCTAAATGTTGGACTAACAGTTCTGAAGCGGAAATGCAGAGAATTCGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCGCTTGACAGTCTCATTCATGAAATTCAGGAAGAGGCAAACAACCAAGAATCGGATGACAAGGCTGCAGCATTGGCAGCGATAGAGAAACGAAGAATGTTGGAGAGTGAAAAGGAGAACCTAGAGAGGAAGCCCTTCATGGACATACAAAGCGAGACGAAGAAGTTGAGGCAGGACATCTTCAAGAGAAGGCATAGAGCGCGAGCTCAGATCAAACTTAATTCGACCGTCACCGGAAGCAGCAGCAACAACAAAACTACAACTTGA 1005 0.4458 MKNTFLTTLLVFKNTIREELIRSVHVYQVKDGKVREVEREFVFSESGSYGEMRSTPILRLQKKLSVAQVSEGYQNGVWLCIFSFHRDHNPQFSTVPNLLLLSRNPKLRTIPTLLKDLRVIYKSEKDNDVLPDTTVEERQGNNRESQPSRKVVPVLIQDLNFLPYEADISESPNNKLDVQALPVADSAEKKKRATSDRVAKITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEANNQESDDKAAALAAIEKRRMLESEKENLERKPFMDIQSETKKLRQDIFKRRHRARAQIKLNSTVTGSSSNNKTTT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241666g00021 334 Coils Coil 270 290 - -
Stsc241666g00021 334 Pfam RWP-RK domain 200 248 IPR003035 -
Stsc241666g00021 334 ProSiteProfiles RWP-RK domain profile. 183 268 IPR003035 -
Stsc241666g00021 334 PANTHER PROTEIN RKD4 171 330 IPR044607 GO:0003700
Stsc241666g00021 334 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241666g00021 Stsc-Chr241666 108010 112206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241666g00021 16 328 AtRKD Transcription Factor Family AT4G35590 44.578 7.66e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Stsc241666g00021 RWP-RK 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241666g00021 - - adu:107475952 590.882