Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241666g00019 ATGGTGGTTGCTATTAAGAAATTGAATCCAGAAAGCACTCAAGGGTTTCAAGAATGGCAGTCAGAAGTAAACTTTTTAGGAAGGCTTTCTCACCCGAACCTGGTAAAGCTATTAGGGTACTGTTGGGACGATGACGAGCTTCTTCTTGTGTATGAGTTCATGCCAAAGGGGAGCTTGGAGAATCATCTTTTCCGGAGGAATCCTAACATCGAACCACTTTCGTGGAACACCCGAATTAAGATAGCTATTGGCGCAGCAAGAGGCCTCGCTTTCTTGCATGCTTCAGAAAAACAAGTCATATACAGAGATTTCAAGGCTTCGAATATACTACTTGACGGGAATTACAATGCGAAAATCTCAGATTTTGGCTTGGCTAAATTCGGCCCTGCTGGGGGAGAATCGCATGTAACTACCAGGGTCATGGGCACGTATGGCTATGCCGCTCCGGAATATATTGCAACAGGTCACTTGTATGTGAAGAGTGATGTGTATGGCTTCGGCGTAGTTCTACTTGAAATGATCTCAGGCATGCGTGCGCTAGATACAAAGCGGCCGACAGGGCAACAGAATCTTGTTGAATGGGTTAAGCCTAATCTCTCCTACAAGAGAAAGTTGAAAACCATAATGGATGCCAGGATTGAAGGCCAATATTCACAGAAAGCGGCGCAGCAGGCGGCGCAACTCACTCTAAAATGCTTGGAACCGGACCCCAAAAACCGGCCGTCGATGAAAGAAGTTGTTGAGGCATTGGAAGCCATAGATGCAATGCAAGATAAATCCAAGGAATCCAAGAACAGAAGCTCTCATCATTCTTCTGCAGCCTCTAAGAATCACCATCATGCAAGGCAAAGAGTTTCAAAAGCAAAAGTATGA 873 0.4525 MVVAIKKLNPESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKFGPAGGESHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMISGMRALDTKRPTGQQNLVEWVKPNLSYKRKLKTIMDARIEGQYSQKAAQQAAQLTLKCLEPDPKNRPSMKEVVEALEAIDAMQDKSKESKNRSSHHSSAASKNHHHARQRVSKAKV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241666g00019 290 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241666g00019 290 Pfam Protein kinase domain 2 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241666g00019 290 Gene3D Transferase(Phosphotransferase) domain 1 55 280 - -
Stsc241666g00019 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
Stsc241666g00019 290 Coils Coil 246 266 - -
Stsc241666g00019 290 CDD STKc_IRAK 2 253 - -
Stsc241666g00019 290 MobiDBLite consensus disorder prediction 271 290 - -
Stsc241666g00019 290 PANTHER OS01G0588500 PROTEIN-RELATED 2 253 - -
Stsc241666g00019 290 MobiDBLite consensus disorder prediction 253 269 - -
Stsc241666g00019 290 SUPERFAMILY Protein kinase-like (PK-like) 2 252 IPR011009 -
Stsc241666g00019 290 PIRSF ILK 1 271 - -
Stsc241666g00019 290 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Stsc241666g00019 290 FunFam Serine/threonine-protein kinase PBS1 54 269 - -
Stsc241666g00019 290 MobiDBLite consensus disorder prediction 253 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241666g00019 Stsc-Chr241666 100726 104367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241666g00019 1 260 Glycoside Hydrolase AT3G07070 51.724 1.01e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc241666g00019 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241666g00019 - - gmx:100794193 467.618