Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241665g00034 ATGGCGAGTAACGAGAACAACGAAAAGAGGAACAACAGGGAGAGCATCGATGAGAAAGAGAAGGAGTTTGAGGAGCAGGTTGTGTTTGATGAGAACGAAGAAGAAGGTGAAGCTCAGGACATTGAAGCTGTCAAGTACGAGAGCGAAAGCAGCAGTAGCAGTGAGAGTGGCAGTGACGATGACGATGGCGAAGGGAATCATCGTCGCAAAGCACATCATCAACCTGAATCATTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTATACCATTGCTGCAGCACCCAATTTCGAATCATTTCTACGAGGGCCGAGTTTTCTGTATTCGAGTTTTGTGAATCGCTCCAAGAGCAGTTTGGACATTGATGGAAAGAGTACTCCTTTTCTGTCAGGTCATGAAGGCATCCAAAGAAGATCATCAACGTGGTGGGAGAAAGCTTCGATTCAAAGGCATGTTACTGGAGAATTTCCCATTGATTATGGATGCAGCTTAGCTCAAACAATTTTCAATGGGATTAATGTTATGTGTGGAGTTGGTCTTCTATCCACACCATATACTGTGAGACAAGCAGGGTGGGCCAGTATGGTGGTGATGCTTCTTTTTGCCGTTATATGCTGTTATACGGCCACCCTTTTGAGACGCTGCTTCGAAAGCAAAGAAGGAATCATTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGTATTGCTGTATCAATCGTTTTGTACACTGAATTATATTCATACTGTGTGGAATTCATTATCTTGGAAGGAGACAATCTTACTAGTCTGTTTCCGGGAACTTCCTTAGATTGGGGAGGTCTCAAGTTAGACTCCGTGCACTTGTTCGGAATTCTGAGTGCACTTCTTATTCTTCCTACTGTTTGGTTAAAGGATCTTCGCTTAATCTCTTATCTATCAGCTGGAGGAGTTGTTGCAACAATATTGATTGTAATCTGTGTGTTCTGTGTTGGAACAATCGATAACGTCGGCTTCCATCACACTGGTGAAGTGGTGAGATGGAGCGGCCTTCCATTCGCCATCGGTATCTATGGCTTTTGCTTTGCAGGACATTCGGTTTTTCCGAATATTTACCAGTCCATGGCAGACAAATCACAATACCCCAAGGCATTAACAACTTGTTTTATTTTGTGCGTTTTGCTATATGGCGGCGTCGCAGTCATGGGATACCTCATGTTTGGTGACAGCATTTTGTCCCAGATAACATTGAATATGCCAAAGGGTGCATTTGCTTCCAAAGTTGCATCTTGGACAACAATCTGCACTGGTTGCATCTACGGTTTGCGCTGCTTTTCTGATTCCATTTTTCGGGCTTGTGATGTCTTTGATTGGTTCTCTCTTCAGCATACTTGTGTCAGTGATAATGCCAAGTCTCTGCTTTCTGAAAATTGTGGGCAAGAAAGCTACAAAGATACAGGTTGCATTGAGCATCATAATTGCTGGAGCGGGAATCATTTGCGGAATCCTTGGAACATATTCCTCTCTGCTAGACATAGCGAATAG 1548 0.4341 MASNENNEKRNNRESIDEKEKEFEEQVVFDENEEEGEAQDIEAVKYESESSSSSESGSDDDDGEGNHRRKAHHQPESFTSQQWPQSYKETTDSYTIAAAPNFESFLRGPSFLYSSFVNRSKSSLDIDGKSTPFLSGHEGIQRRSSTWWEKASIQRHVTGEFPIDYGCSLAQTIFNGINVMCGVGLLSTPYTVRQAGWASMVVMLLFAVICCYTATLLRRCFESKEGIITYPDIGEAAFGKYGRIAVSIVLYTELYSYCVEFIILEGDNLTSLFPGTSLDWGGLKLDSVHLFGILSALLILPTVWLKDLRLISYLSAGGVVATILIVICVFCVGTIDNVGFHHTGEVVRWSGLPFAIGIYGFCFAGHSVFPNIYQSMADKSQYPKALTTCFILCVLLYGGVAVMGYLMFGDSILSQITLNMPKGAFASKVASWTTICTGCIYGLRCFSDSIFRACDVFDWFSLQHTCVSDNAKSLLSENCGQESYKDTGCIEHHNCWSGNHLRNPWNIFLSARHSE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241665g00034 515 MobiDBLite consensus disorder prediction 7 26 - -
Stsc241665g00034 515 MobiDBLite consensus disorder prediction 1 86 - -
Stsc241665g00034 515 Pfam Transmembrane amino acid transporter protein 168 431 IPR013057 -
Stsc241665g00034 515 Coils Coil 2 26 - -
Stsc241665g00034 515 Gene3D Amino acid/polyamine transporter I 166 447 - -
Stsc241665g00034 515 MobiDBLite consensus disorder prediction 60 75 - -
Stsc241665g00034 515 PANTHER OS05G0424000 PROTEIN-RELATED 175 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241665g00034 Stsc-Chr241665 246895 253382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241665g00034 45 437 Amino Acid or Auxin Permease AAAP Family AT2G41190 64.070 5.59e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241665g00034 K15015 - gmx:100816431 646.351