Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241665g00001 ATGGAGCATTTAGATCTGTTTTGTGTGATGCTTTCGTTGCTTCATATCCAAACATCCAGTACAGCCCAGCAGCTTGGTTCTGTGGTTCCTGGAACAATTGATGGGAAGTTTGATGGCGGCTATATAGTTAAAGTGGATCTGGGTTCTGAACAAGTGAAAGGTATTTTGTACCATGTACCCATCAGTTTGTCCCAGAGCTCTAATACTGTTGGCATCCATGGTTCACGGAATCCAAAGAAATCTAAATTGGCAAAACATGATCCATCTCGACCAAAGTCAAACAGGAGTGGCTACAATTTCTTCTTTGCTCAGAACTATGCCAGCTTGAGACCCTTATTCCATGGTCAAGAGAGAGCGATTAGTAAGAGGATTGGGTTTCTATGGAACAATCTAACAGAAGCAGAAAGACAGGAATCTTTGATTGCCACTAATTGTGCAACCGTTTATCACTTGACCAAGGAAGTTTCCCTTGAAGTACCTGGTCCCCCAAAG 492 0.4268 MEHLDLFCVMLSLLHIQTSSTAQQLGSVVPGTIDGKFDGGYIVKVDLGSEQVKGILYHVPISLSQSSNTVGIHGSRNPKKSKLAKHDPSRPKSNRSGYNFFFAQNYASLRPLFHGQERAISKRIGFLWNNLTEAERQESLIATNCATVYHLTKEVSLEVPGPPK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241665g00001 164 SUPERFAMILY HMG-box 78 137 IPR036910 -
Stsc241665g00001 164 Gene3D High mobility group box domain 74 147 IPR036910 -
Stsc241665g00001 164 MobiDBLite consensus disorder prediction 68 95 - -
Stsc241665g00001 164 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 19 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241665g00001 Stsc-Chr241665 8059 9552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241665g00001 24 137 ARID Transcription Factor Family AT3G13350 53.719 1.24e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241665g00001 - - adu:107491521 214.927