Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241664g00009 ATGGCACAATTGCCGCCAAAGATTCCTAACATGGCAACTAATTGGCCTGAGTTTTCATCCGATCATCACCACCAACACCCCCATGACCAACACCAAAAGATGCCTTCTCTCACAAGCATTTCAACAAACACAAACCGGCACCAACACCAGCAGCAGCAAAACCCTTCGTGGGTTGACGAGTTCCTGGACTTCTCGTCCGCGAGGCGCGGGGCCCACCGACGGTCCATGAGCGACTCCATCTTCTTGGAGTCGCCCAGGCACGTTAACCACGGCAGCAGCAACGGCGGAGGCGGAGGAGTAGAAGGAGATGAGTTTGATAGATTCGATGATTATCAATTCATGAACATGTTCAGTGATGAGGTAGTTTCCGGCGGCGATAACAATAATAATAACAACAACAATAACAATTCCGTGAATATGATGAGTATGATGATGGTGCCGCCGCCGCCGACGTTGTCCACGTCATCAAATCCTTCTAGTCCTTCGGATCATGACAGCATCAACGATAATGAGAGAGAAGCAATCAACAAAGAGATCAACAATAAGAATCTCCATCATCATCACGAGCATCAACAACAAGTGAAGGTGGAATCTGATGAAGATGAAAGCCAATGCAATAATAATAAAGCTCAGGATGATGATGATAGCGGTAAGAATAACAATACTGACACAGATGCAAATGCTGCTACAACTCCTTCAAGCGAAAAAATTACAGACCCCAAGAGGGTAAAAAGGATTTTGGCTAATAGACAATCAGCACAAAGATCAAGGGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGTAGTGTAACATCATTACAGGCGGAAGTTTCAGTATTATCACCTCGGGTGGCATTTTTGGATCACCAACGTTTGCTTCTAAATGTTGACAATAGTGCTCTCAAGCAAAGAATCGCAGCTTTGGCACAGGACAAGATCTTCAAAGATGCTCATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTAAGGCAAGTGTATCACCAACTAAACGTGAAGAAGACTATGGAAATTGCTTCAGCTACAGTGTCACCTTCAATATCTCCATCATCTTCAGCAAGACCACGTTGTGATACTCAGAATAATGAAAAGGAACAGCTTATCAATGTTTGA 1134 0.4453 MAQLPPKIPNMATNWPEFSSDHHHQHPHDQHQKMPSLTSISTNTNRHQHQQQQNPSWVDEFLDFSSARRGAHRRSMSDSIFLESPRHVNHGSSNGGGGGVEGDEFDRFDDYQFMNMFSDEVVSGGDNNNNNNNNNNSVNMMSMMMVPPPPTLSTSSNPSSPSDHDSINDNEREAINKEINNKNLHHHHEHQQQVKVESDEDESQCNNNKAQDDDDSGKNNNTDTDANAATTPSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQLNVKKTMEIASATVSPSISPSSSARPRCDTQNNEKEQLINV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241664g00009 377 Gene3D - 240 313 - -
Stsc241664g00009 377 FunFam Basic leucine zipper 61 240 313 - -
Stsc241664g00009 377 SMART brlzneu 237 301 IPR004827 GO:0003700|GO:0006355
Stsc241664g00009 377 PANTHER BASIC LEUCINE ZIPPER 34 1 367 - -
Stsc241664g00009 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 239 291 IPR004827 GO:0003700|GO:0006355
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 186 242 - -
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 186 220 - -
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 121 142 - -
Stsc241664g00009 377 CDD bZIP_plant_RF2 242 292 IPR044759 GO:0003700|GO:0006355
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 350 377 - -
Stsc241664g00009 377 Coils Coil 320 340 - -
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 1 36 - -
Stsc241664g00009 377 SUPERFAMILY Leucine zipper domain 241 295 IPR046347 GO:0003700|GO:0006355
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 85 105 - -
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 120 168 - -
Stsc241664g00009 377 MobiDBLite consensus disorder prediction 221 236 - -
Stsc241664g00009 377 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 244 259 IPR004827 GO:0003700|GO:0006355
Stsc241664g00009 377 Pfam bZIP transcription factor 241 285 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241664g00009 Stsc-Chr241664 82592 86579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241664g00009 1 318 bZIP Transcription Factor Family AT3G58120 53.659 9.55e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc241664g00009 bZIP_1 4.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241664g00009 - - ahf:112737744 482.641