Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241663g00002 ATGAAGAAATTTGAAGTGGAAGTAACCTCCACAGAAATGATAAAACCTTCTGCTCCAACTCCAAACCACCTTCGATGTTATCAACTCTCTTTTCTTGATCAAATCTCTCCCATGGTTTACAACCCCGTTGTTCTCTTCTACTCTTTCAACCAAATCGATGCAACCACCACCCCCACAATCTCCAACCTCCTCAAGAAATCTCTCTCCCTTGCCCTAACACATTTCTACCCTCTTGCCGGACGGATCGACCGTGGCAAGGGCTTCGTCGACTGTACTGACGACGGCGTACCTTTTATAGAAACAAAAGTGAAGAATTGCAAGCTTGCTGAAGTTATTCATAATCCAATTCCTGGAGAACTCAACAATCTACTTCCATTCAAACTGAGCAACACAACCAACATCATATTGGGAGTACAGCTCAACGTTTTCGATTGCGGCGGCATTGCAATCGGCGCGTGTCTTTCACACCAAATCTCTGACGCGTTATCATTCTTCAAGTTCCTTAGTTCTTGGTCTTCCATTGCTGCCAAAAATGGAAACTTACCAAATCCACAGTTTCTTTCGTCAAAGCTTTTTCCTCCGATAAACACCTCCGGCTTCGATCCAAATGGCCACATAACGACGGAGAACGTGGTGTGCAAGTTGTTCGTCTTTGATTCAAGCGTTGTTGAAACCCTAAGGGAAAAATATGCAATGGAAAACAATAATGATGATTGTGAAGAGAAAAGACCAACTCGTGTTGAGGCTTTATCTGCGTTTATTTGGGATCGTTACGTGGCAGTTACGAGAGATCACAAAAGTTGTTATGAAAACAAGAAGAGGAGAATGCATGTTGTGATCCATACTGTGAATCTAAGGCCAAAGATGGAACCGCCGTTATCGGAAGATTCCTTTGGGAACTACTATCGAGTCTCCATGACGGTTCCATCTTTGGACGAGGAAGAAAAGTGTTATGAATTTGGGAAGCAGATGAGGGATCAAATAAAGAAGATAGACAAGGAATACGTTAGAAAACTACAAGAGGGAAAAGAGCATTTGAATTTCCTTAAGGATAGTTCACAAAGGCTTCTTATGAAGGGAGAATTGGTTTCGTTCACCTTCACAAGTCTATGTAGGTTTCCTCTCTATGATGCTGATTTCGGTTGGGGCAAACCAACATGGGTAGGTTTACCTGCCTTAACTTTTAAGAATCTTGTTGTGTTTTCTGACACTGAGACTGGTGGTGCCATTGAAGCCTATGTTAGCTTGAGCATGGAAGACATGGCAAAATTTGAGGCAGATAAGGAGTTCCTTGCTTGTGTCAACAAGCCATAA 1314 0.4254 MKKFEVEVTSTEMIKPSAPTPNHLRCYQLSFLDQISPMVYNPVVLFYSFNQIDATTTPTISNLLKKSLSLALTHFYPLAGRIDRGKGFVDCTDDGVPFIETKVKNCKLAEVIHNPIPGELNNLLPFKLSNTTNIILGVQLNVFDCGGIAIGACLSHQISDALSFFKFLSSWSSIAAKNGNLPNPQFLSSKLFPPINTSGFDPNGHITTENVVCKLFVFDSSVVETLREKYAMENNNDDCEEKRPTRVEALSAFIWDRYVAVTRDHKSCYENKKRRMHVVIHTVNLRPKMEPPLSEDSFGNYYRVSMTVPSLDEEEKCYEFGKQMRDQIKKIDKEYVRKLQEGKEHLNFLKDSSQRLLMKGELVSFTFTSLCRFPLYDADFGWGKPTWVGLPALTFKNLVVFSDTETGGAIEAYVSLSMEDMAKFEADKEFLACVNKP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241663g00002 437 PANTHER F21J9.9 7 434 - -
Stsc241663g00002 437 Gene3D - 3 199 IPR023213 -
Stsc241663g00002 437 Gene3D - 208 433 IPR023213 -
Stsc241663g00002 437 Pfam Transferase family 5 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241663g00002 Stsc-Chr241663 13044 17498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241663g00002 5 425 Monolignol Biosynthesis Gene Families AT5G48930 23.684 3.99e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241663g00002 K13065 - gmx:102670206 568.155