Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241662g00021 ATGTTGGATTCGGAGTTCAATGCTAAATTAGGAGATTTCGGATTGGCACGAACTATTCAAGAGAAAAATGAAACTCATCATTCCACAAAGGAGATTGCAGGGACGCCAGGGTACATGGCCCCGGAAACATTCCTCAACCGAAGGGCGACGGTGGAAACCGATGTGTACGCGTTCGGCGTTCTTGTGTTGGAAGTTGTGTGCGGAAGAAGGCCGGGGAATGTGAACGGACAAGATGATTACAAGAACAGCATTGTGTATTGGGTTTGGGAGCTTCATGGGAAGGGGAAAATAGTGAGTGCTTTGGACAAAAGGATAAGTGATGAAGAGATTAAGGAAGAAGAAGTTTGTAGTGTTCTTGTTTTGGGGTTGGCTTGTTGCCATCCAAACCCACACCACAGGCCTTCAATGAGAACTGTTCTGCAAGTTTTGAACAGGGAAGCACCTCCGCCAATGGTGCCTCAAGAGAGACCTGCTTTTGTGTGGCCTGCTATGCCTCCATCTTTCAATGAAGGTGTTGATACTTATTCAGTTCTCAACGGACAAGTCACTCCCATATTCACTGAAATGAGTGGTAGATGA 579 0.4629 MLDSEFNAKLGDFGLARTIQEKNETHHSTKEIAGTPGYMAPETFLNRRATVETDVYAFGVLVLEVVCGRRPGNVNGQDDYKNSIVYWVWELHGKGKIVSALDKRISDEEIKEEEVCSVLVLGLACCHPNPHHRPSMRTVLQVLNREAPPPMVPQERPAFVWPAMPPSFNEGVDTYSVLNGQVTPIFTEMSGR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241662g00021 192 Gene3D Transferase(Phosphotransferase) domain 1 1 161 - -
Stsc241662g00021 192 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 164 - -
Stsc241662g00021 192 FunFam Lectin-domain containing receptor kinase A4.3 1 162 - -
Stsc241662g00021 192 ProSiteProfiles Protein kinase domain profile. 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241662g00021 192 SUPERFAMILY Protein kinase-like (PK-like) 1 164 IPR011009 -
Stsc241662g00021 192 Pfam Protein kinase domain 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241662g00021 Stsc-Chr241662 136988 137566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241662g00021 1 157 Receptor kinase-like Gene Family AT3G53380 48.765 8.58e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc241662g00021 Pkinase 5.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241662g00021 - - gmx:100788762 315.849