Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241662g00018 ATGGCCCGCTTTCCGCCCTCCGCCTCCGCCATCTTAGCTCGCCGCCCATCCTCACCAGGGACCACCACTCGGAATGTTATCAAGCAAGCTAGGAAATCTGATCCACGTATTACAGCAAGCCTCACTAGGCTCCACTTTCATGATTGCTTTGTCAATGGTTGTGATGCGTCGCTGTTGCTAGACGTGGGTGGGAACATAACAGAGAGCGAGAAAACTGCAGCTCCTAATAACAATTCAGCCAGGGGCTTTAATGTAATTGACAACATTAAAGCTGCTCTTAATAAATCATGCCCTGGTATTGTGTCTTGTGCTGATATTCTTGCTCTTGCTGCTGAAGCTTCCGTCTCCTTGGAAAAAGGTCCTTCGTGGAAGGTATTACTTGGAAGAAGGGATGGTTTTACAGCGAACAAAGCTGGAGCCAATACCTCTCTTCCAACTCCATTTGAGACTCTAGCTCAGATCACTGCCAAATTCAATGCTGTTAATCTCAGTGTAACGGATCTCGTTGCATTATCTGGTGCACACACATTTGGACGCGCCCAGTGCAAATTCTTCTCCCAGCGGCTCTTCAACTTCAATGGCACAGGCAACCCCGATCCAACACTGAACTCAACCTATTTAACAACTTTGCAACAGAATTGTCCCCAAAACGGAAACGGTTCAATTCTCAACAACTTGGACCCTTCCACCCCCAACGCATTCGACAACAACTACTTCACCAACCTTCTCAACAAGCGGGGTCTTCTCCAAACGGATCAAGAACTCTTCTCCACCAACGGATCTTCAACAATTTCAATTGTCAACAACTTCGCTAAGAACAAGAATGCCTTCTTCAAAGCCTTTGCTCAGGCAATGATCAATATGGGCAATATTAGTCCCTTGACGGGCACTCAAGGTGAAATCAGAAACGATTGCAAGAAAGTTAACGGAAGTTAG 936 0.4647 MARFPPSASAILARRPSSPGTTTRNVIKQARKSDPRITASLTRLHFHDCFVNGCDASLLLDVGGNITESEKTAAPNNNSARGFNVIDNIKAALNKSCPGIVSCADILALAAEASVSLEKGPSWKVLLGRRDGFTANKAGANTSLPTPFETLAQITAKFNAVNLSVTDLVALSGAHTFGRAQCKFFSQRLFNFNGTGNPDPTLNSTYLTTLQQNCPQNGNGSILNNLDPSTPNAFDNNYFTNLLNKRGLLQTDQELFSTNGSSTISIVNNFAKNKNAFFKAFAQAMINMGNISPLTGTQGEIRNDCKKVNGS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241662g00018 311 PRINTS Haem peroxidase superfamily signature 119 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Haem peroxidase superfamily signature 38 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Haem peroxidase superfamily signature 167 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Haem peroxidase superfamily signature 101 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 100 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 166 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 40 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 119 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 81 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 CDD secretory_peroxidase 24 308 IPR033905 GO:0004601|GO:0042744
Stsc241662g00018 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 167 177 IPR019793 -
Stsc241662g00018 311 MobiDBLite consensus disorder prediction 14 28 - -
Stsc241662g00018 311 ProSiteProfiles Plant heme peroxidase family profile. 24 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 MobiDBLite consensus disorder prediction 1 31 - -
Stsc241662g00018 311 PANTHER PEROXIDASE 72-RELATED 22 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 Gene3D Peroxidase, domain 2 145 288 - -
Stsc241662g00018 311 Pfam Peroxidase 24 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 Gene3D - 23 309 - -
Stsc241662g00018 311 SUPERFAMILY Heme-dependent peroxidases 22 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00018 311 FunFam Peroxidase 145 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241662g00018 Stsc-Chr241662 94279 100867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241662g00018 6 311 Peroxidase AT5G06720 69.608 4.65e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241662g00018 K00430 - gmx:100811249 460.685