Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241662g00017 ATGAAGAACGATGTCAAAGTCGATGATAGAGAACTTAGGAGAGTCGAAGTCGAGATCAGCACGAATTCTCAGTCACCACTGACGCATGGAAACCAATGGAGAACAAGTGCAGCATCTCCCTCAAATGCTCAATTGAGTTCAACATTCTATTCAAGCACATGTCCGAATGTATCATCCATTGTTAGTAATGTTATTCAGCAAGCTCGGCAGTCCGATCCACGTATTACAGCAAGCCTCACTAGGCTCCACTTTCATGATTGCTTTGTCAATGGGTGTGATGCGTCCCTGTTGCTAGACGTGGGTGGGAACATAACGGAGAGCGAGAAAACTGCAGCTCCTAATAACAATTCAGCCAGGGGCTTTGATGTAATTGACAACATTAAAGCTGCTCTTAATGCATCATGCCCTGGAATTGTGTCTTGTGCTGATATTCTTGCCCTTGCAGCTCAAGCTTCAGTCTCCTTGGAAGGAGGTCCTTCATGGAACGTACTACTTGGAAGAAGGGATGGTTTTACAGCGAACAAAGCTGGAGCCAATACCTCTCTTCCAACTCCATTTGAGACTCTAGCTCAGATCACTGCCAAATTCAGTGCAGTTAATCTGGGTACAACCGATCTCGTTGCATTATCTGGTGCACACACGTTTGGACGCGCCCAGTGCAAATTCTTCTCCCAGCGGCTCTTTAATTTCAATGGCACAGGCAACCCCGATCCAACATTGAACTCAAGCTATTTAACAACATTACAACAGAATTGTCCCCAAAACGGAAACGGTTCAACTCTCAACAACTTGGACCCTTCCACCCCCAACGCATTCGACAACAACTACTTCACTAACCTTGTCAACAATCAGGGCCTTCTCCAAACGGACCAAGAACTCTTCTCCACAAACGGATCTTCAACGGTTTCAATTGTCAACAACTTTGCTAACAACCAAACTGCTTTCTTCCAAGCATTTGCTCAGGCAATGATCAATATGGGCAATATTAGTCCCTTGACCGGGACTCAAGGTGAAATCAGAAACGATTGTAAGAAAGTTAACGGAAGTTAA 1050 0.4495 MKNDVKVDDRELRRVEVEISTNSQSPLTHGNQWRTSAASPSNAQLSSTFYSSTCPNVSSIVSNVIQQARQSDPRITASLTRLHFHDCFVNGCDASLLLDVGGNITESEKTAAPNNNSARGFDVIDNIKAALNASCPGIVSCADILALAAQASVSLEGGPSWNVLLGRRDGFTANKAGANTSLPTPFETLAQITAKFSAVNLGTTDLVALSGAHTFGRAQCKFFSQRLFNFNGTGNPDPTLNSSYLTTLQQNCPQNGNGSTLNNLDPSTPNAFDNNYFTNLVNNQGLLQTDQELFSTNGSSTVSIVNNFANNQTAFFQAFAQAMINMGNISPLTGTQGEIRNDCKKVNGS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241662g00017 349 PANTHER PEROXIDASE 72-RELATED 43 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 ProSiteProfiles Plant heme peroxidase family profile. 44 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 Gene3D Peroxidase, domain 2 183 326 - -
Stsc241662g00017 349 Gene3D - 49 347 - -
Stsc241662g00017 349 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 FunFam Peroxidase 48 195 - -
Stsc241662g00017 349 FunFam Peroxidase 183 326 - -
Stsc241662g00017 349 CDD secretory_peroxidase 44 346 IPR033905 GO:0004601|GO:0042744
Stsc241662g00017 349 MobiDBLite consensus disorder prediction 19 38 - -
Stsc241662g00017 349 SUPERFAMILY Heme-dependent peroxidases 44 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241662g00017 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Stsc241662g00017 349 Pfam Peroxidase 62 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241662g00017 Stsc-Chr241662 87936 92829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241662g00017 41 349 Peroxidase AT5G06720 73.786 5.19e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241662g00017 K00430 - gmx:100811249 516.538