Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241662g00013 ATGACCATGGAACCAAACCCAACACAAGATGCTCTTGACTGGCAGCTTGAAGGTTCTGCCTCTTTCTTCCCACCATTCTTGGATTATCCATATCCCATTCAAGATTATCACTTCTGGGATCAAAGCCAAGACATAATCTCCTACCATAACCAAATTGATCCTGCTACCGGATACCCCAACACCGGAAACGGCGCTGCCGCCGTTGTGGCCACCACTGCCACCAGTACAACCTGCACAACACCCTCAGATCCTGAACCTTACAGTTACAACAACCTTCCGGTCTCCGACTTGCCCACGAAGAAACGAAACTCCGCCGGCGACAATGAATGTTCAGTCCAAAAGCCTTCACAACACCATAGAGCCAAGAAATTCAAGGCTCGTTCAACTAATGAAGCTGACAATGGTGATTCGGTTGCTGAAGGAATTAGTGTTAGAAAATCCGGTGGCAACAGAAAAGGTGGAGGCAAGAACAATGGCAATAGCTGCAACAATGGAAACAAGGAAGGCAGGTGGGCAGAACAGTTGCTCATCCCTTGTGCTTCAGCTATAACCGCTAGAAACTTGAACCGTGTGCAGCACCTATTGTATGTTCTCCATGAGCTAGCCTCGCCTACTGGCGATCCGAATCACCGGCTCGCGGCACACGGTCTCAGGGCACTGACAAACCATCTGTCATCATCATCATCTACCACAAATTGTACAACAACAACCGATTCAGGGACTATGACTTTTGCATCAGTGGACTCCAAATTCTTCAACAAGGCACTCCTCAAGTTCTATGAGGCTAGTCCCTGGTTTTCTTTTCCTAATAACATAGCAAACGCTTCAATCCTTCAATTACTTGCTGAAGAAGAATCAAGTAGTCCGCGCACTCTTCACATCCTTGACATTGGAGTCTCCCATGGTGTTCAATGGCCTACTTTTCTTGAAGCTTTAACCCGCAGACCCGGCGGACCTCCGCCGTTGGTTCGCCTCACCGTTGTAACCGCTTCCTCCAACGAAAACGAACAGAACATGGAAGCCCCTTTCTCTGTTGGTCCTCCTGGTGATAACTCCTCTTCTTACCTCCTCGGTTATGCTCAAAGCCTTAAGCTCAATATGCAGATAAACACGATTGATAATCTTGAACTACACAACTTGAATTCGAAGATTATTGACACGTCTTCGGATGAAACATTCATTGTGTGTGCACAGTTTAGACTCCACCATTTAAATCACAAGAATCCAGATGAGAGGAGCGAGTTCTTGAAGACTTTGAGAAGCATGGAGCCTAAAGGAGTGATACTGAATGATAACAACACGGAATGCAGCTGCAATGGGTGCGGGAGCTTCGCGGCGGGATTCTCTCGGAGAGTGGAGTACTTGTGGAGTTTCTTGGACTCGACGAGCGTGGCGTTCAAGGGGAGGGAGAGTGAGGAGAGGAGAGTGATGGAAGGGGAGGCGGCGAAGGCGCTGACGAACCAGAGGGAGATGAATGAAGGGAAAGAGAAATGGTGTGAGAGAATGAAGGAGGCAGGGTTCGTAGAGGGAAAGCTTGATGATGACACCATTGATGGAGCTAAAGCTTTGTTGAGGAAATATGATAATAACTGGGAGATGAAAGTTGAGGAGGGAAACAAGAGTGTTGGATTGTTCTGGAAGGATCAGCCTGTTTCTTTCTGTTCTTTGTGGAAATTGGATGGGGGAGAAAATCAAGGTAGATCAAGCTCTACTTTGAATTCGCGTCTATAG 1731 0.4743 MTMEPNPTQDALDWQLEGSASFFPPFLDYPYPIQDYHFWDQSQDIISYHNQIDPATGYPNTGNGAAAVVATTATSTTCTTPSDPEPYSYNNLPVSDLPTKKRNSAGDNECSVQKPSQHHRAKKFKARSTNEADNGDSVAEGISVRKSGGNRKGGGKNNGNSCNNGNKEGRWAEQLLIPCASAITARNLNRVQHLLYVLHELASPTGDPNHRLAAHGLRALTNHLSSSSSTTNCTTTTDSGTMTFASVDSKFFNKALLKFYEASPWFSFPNNIANASILQLLAEEESSSPRTLHILDIGVSHGVQWPTFLEALTRRPGGPPPLVRLTVVTASSNENEQNMEAPFSVGPPGDNSSSYLLGYAQSLKLNMQINTIDNLELHNLNSKIIDTSSDETFIVCAQFRLHHLNHKNPDERSEFLKTLRSMEPKGVILNDNNTECSCNGCGSFAAGFSRRVEYLWSFLDSTSVAFKGRESEERRVMEGEAAKALTNQREMNEGKEKWCERMKEAGFVEGKLDDDTIDGAKALLRKYDNNWEMKVEEGNKSVGLFWKDQPVSFCSLWKLDGGENQGRSSSTLNSRL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241662g00013 576 MobiDBLite consensus disorder prediction 77 98 - -
Stsc241662g00013 576 Pfam GRAS domain family 173 558 IPR005202 -
Stsc241662g00013 576 MobiDBLite consensus disorder prediction 77 165 - -
Stsc241662g00013 576 ProSiteProfiles GRAS family profile. 163 558 IPR005202 -
Stsc241662g00013 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 156 548 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241662g00013 Stsc-Chr241662 66214 68289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241662g00013 2 558 GRAS Transcription Factor Family AT3G13840 48.587 4.69e-165 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc241662g00013 GRAS 5.3e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241662g00013 - - mtr:11434050 687.567