Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241662g00001 ATGAGTGCAAGTTTAAGTGTTAGTAGTGCAAGGAATAGTAGTAGGTCTCCTTTCACACCAAATCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTCAAGTACATGGTTACAGGAACCCCAATCCCAGCAGATCTCATTTTCTCAATCAAAAGAAGCCTTGACTCCTCAATTTCTTCAAGACTCTTCCCACACCATCCAAGTAACTCACTTGGGTATGCATATTTTCAAATGGGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGGTGCTCCAAGGAAGCATATCCAGATTCTAAGTACTGTGAAAGGCACATGCACAGAGGCAGGAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCACCATTGATCCCATCTTCAACTACTCCAACCGCTAACACAAACACAAACAACAGCATTTCCCAACTCATCAATCATCATCATCATCATCAATCTTCTTCTTCTTCTTATACCATTACCAACAATATGCCTTCATCAGCATCAGCATGTTCTTTCAGTTTCAACCCATTGCCTTCATCATCATCTTCTTCTTTGCATCAATCTGAGTCATCATCACCACAGCAGCAATTCTTCTCCCAATCTTACCAAAACCCCTTCTTTTACAACCAATCAACATCTTCCTCTTCTTCTTCTAAACCCCATGATGCAGATTTTCCTCCTCATCAAGATGCCACCACACACCACCTTTTCATGGACTCCGG 752 0.4229 MSASLSVSSARNSSRSPFTPNQWQELEQQALVFKYMVTGTPIPADLIFSIKRSLDSSISSRLFPHHPSNSLGYAYFQMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSPLIPSSTTPTANTNTNNSISQLINHHHHHQSSSSSYTITNNMPSSASACSFSFNPLPSSSSSSLHQSESSSPQQQFFSQSYQNPFFYNQSTSSSSSSKPHDADFPPHQDATTHHLFMDSG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241662g00001 251 MobiDBLite consensus disorder prediction 191 251 - -
Stsc241662g00001 251 MobiDBLite consensus disorder prediction 1 21 - -
Stsc241662g00001 251 PANTHER GROWTH-REGULATING FACTOR 5 13 230 IPR031137 GO:0005634|GO:0006351|GO:0032502
Stsc241662g00001 251 Pfam QLQ 17 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc241662g00001 251 SMART QLQ_2 16 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc241662g00001 251 ProSiteProfiles QLQ domain profile. 17 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc241662g00001 251 MobiDBLite consensus disorder prediction 191 232 - -
Stsc241662g00001 251 MobiDBLite consensus disorder prediction 117 148 - -
Stsc241662g00001 251 Pfam WRC 86 128 IPR014977 -
Stsc241662g00001 251 ProSiteProfiles WRC domain profile. 85 129 IPR014977 -
Stsc241662g00001 251 MobiDBLite consensus disorder prediction 130 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241662g00001 Stsc-Chr241662 98 849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241662g00001 4 128 GRF Transcription Factor Family AT3G13960 71.200 6.73e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Stsc241662g00001 WRC 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241662g00001 - - ahf:112710413 318.931