Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241660g00066 ATGGGTGTTCCTGTAATTGAGTTGCAATGGAAGCCATCGCTGAGTAGAATGGCCACGAGAAGAGAATTGCCAGGGAAATCGTTTCCACGAAACCAGAAAGAAATGGAGTCTCCCCTGCAGCGCTGCTCAAACCACCTTAGAATCCTTCCTGGCATAACAAACCTGCACTTCTCATTCTGTGACACTCACGATCTCTCTCACTTCTCAGTCAATCTCAAATCAAAAGAAACCCTAGCAGAGCTCCAATTCATCACCGGCACCGGCACCGACACCGACACCGACACCGGCGCCACTACCCCGAAGCAGATTCATGAGATTAAGGATTTCCTTCTAACTGCAAGGAGGAATGATGCACGATCGGTGAAGATCAAGAGGAGCAGACACGCTCTGTGTCTTCGACTCTGA 405 0.4963 MGVPVIELQWKPSLSRMATRRELPGKSFPRNQKEMESPLQRCSNHLRILPGITNLHFSFCDTHDLSHFSVNLKSKETLAELQFITGTGTDTDTDTGATTPKQIHEIKDFLLTARRNDARSVKIKRSRHALCLRL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241660g00066 134 Gene3D - 99 131 IPR038464 -
Stsc241660g00066 134 PANTHER 60S RIBOSOMAL PROTEIN L38 100 129 IPR002675 GO:0003735|GO:0005840|GO:0006412
Stsc241660g00066 134 Pfam Ribosomal L38e protein family 100 127 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241660g00066 Stsc-Chr241660 327484 328251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241660g00066 100 127 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.857 7.82e-12 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241660g00066 K02923 - egt:105955349 57.7658