Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241660g00063 ATGGATATGCAATCTCCCTTCTCCTCAATCCATTCCATCAATTATGAAAATCAATGGAAATACGATGTGTTTCTTAGCTTTAGAGGCAAAGACACTCGCTACGGTTTCACCGGCAATCTTTATGAAGCCCTTTCCGGCAAAGGAATCAACACCTTCTTTGATGATGACGACATTCAAAGTGGAGACGAAATTACTCCCACACTTCTCACAGCAATTGAAGAGTCTAGGATTGCTATCATTGTCCTCTCTCCTAACTATGCTTCTTCTTCTTTTTGCTTAGATGAGCTTGTTCACATCCTTCGTTGCATTAAGCGAAATAATCGCTTGGTTGTGCCAGTTTTCTATGATGTGGATCCTTGTGATGTGCGCCATCAAATAAATAGCTTTGGAAAATCTATGACTAAGCATGAGGAGAGATTCAAAAGCGACTTGAACAAGGTACAGATATGGAGGGATGCTCTGCATGAAGTAGCTGAATTGTCTGGCTATCATTTCAAACAAGGGGATGGATATGAACACATGTTTATTGCAAACATTGTGGATAACATCTCAAAAAGGATTACACGATGCCCAGCTTTGCATGTTGCTGATCACCCAGTTGGACTGCAATCCCAACTGTCAGAGGTAGCTTCTCTTCTAGATGTTGAATCTAATGCTGGTGTTCACATGGTAGGGATATATGGAATTGGGGGAATAGGAAAAACCACTCTTGCTGCTGAAGTTTACAACTTGATTGCTGACCATTTTGAAGGTGTGTGTTTTCTTGAAAAAGTGAGAGAAAATTCAAATAGACACGGTTTAGTACATCTCCAAACTATCCTTCTTACTGAGATATTAAGAGAGAAGGATATTAAGCTAACAAGTAGTAAACAAGGAGCTTCAAAGATACATAACAGGCTATGTCGAAAGAAAGTTCTTTTGGTTCTCGATGACGTTGATGATCCAGAGCAGTTGAAAGCTATTGCTGGAAAACCCGAGTGGTTTGGTCCTGGTAGCAGAGTTATTATTACAACACGGGATAAACATTTGCTAACACTTCATGGTATTGAAAGAACATACCAAGTACAAGATTTAAATGAGGAGGACTCCTTAAATTTGCTTACTTGGAATGCTTTTAAATCTGATGTTGTTAGTCCAAATTACATGAATGTTTTATCCCGTGTAGTGGCTTATGCTTCTGGGCTTCCGTTGGCTTTGGAAAGTGTTTTTCTGGATATAGCTTGTTGTTTGAAAGGATATTCATTAGACGAAATTACAGATTTACTTCAAGCTCATTATGGGAGTTGCATGGAATATCAGATTCGAGTATTGGTTGAAAAATCTCTCATAAAGGTTCTGCATGGTACAAAAGTGGAAATACATGATTTGATAGAGAACATGGGCAAAGAAATTTTCCTAGAAAAATCACCAGAAATACCTGGAAAGCGCAGTAGGTTATGGTCTTGTGAAGATATAGTAGAAGTTTTAGAAAACAAACAAGGGACTAGTGCAGTTGAAATTATATATCTAGAATTTCCTTTCTTTAGAAGGGAAAGAGATGAAGATCCAATGACAAAAGAGAAATGTGAAGATGTACAAGTGAAATGGGATGGAACAGCTTTTAAAGAGATGACAAATCTCAAAACGCTGATCATAAAAAATGGTTATTTTTCGAGAAGTCCTAAACATCTTCCAAACAGTTTAAGAATGTTGGAATGGTGGAGATATCCTGCAAGATGTTTTCCAAATGATTTTCATCCAAAGAAGCTAACCATACTCATGTTACCTGATTATCCCCATGCGATACCCGAGTTGGATAGCTTATCCAAGGCAGGTGGGTTGGACACCTTAACAGTTTTGAATTTTGATAAAAGTGAATTTTTAAAAGAGATACCCGACGTGTCTAGTCTTCAAACTTTACAAGAATTATCTTTCAGAGAATGTAAAAATTTAGTTAGAGTTGACAGTTCAGTTGGTTTTCTACCAAAGCTTAAAATATTGAATGCTGAATATTGTGAGAAGCTTAGTTGTTTTCCACCTGCTATCAATTTGCCCTTGCTGGAAACACTCAAACTATCTTATTGCGGAAGCCTCGAGAATTTTCCAGAAATACTACAAGAGATGAAAAACGTAACTGAGCTTTTTTTGTACAACACTAGCATAAAAGATTTGCCATGTTCATTTCGTAACCTTTCTGGGTTGTCGTATTTGGATATGGGAAAGAATAAAATGTGTAGGATGCCAAGTGTCATTGTCATGATGCCACAACTGGCTAATTGTACGATTGGCAATAAGGGGAAGGTATCAGGAGAGCAGGAGAAGGAGGGGCTTCAACTTCAAGTTGAAGGAATACTCACTCACTCCCTCTGCTCTTCAAAACTAAAAACTCTTCATCTCAACAACTTGAAGGAGGGGCTTTCAGATGGTTTTTTTCCACTGGCTCTTGCATGGTTTCCCAATCTGACCTTGTTAGACCTAAGAGGCAGTAATTTCACAATCCTTCCTGAATGCATTCAAGAATTTCGATTTCTAAAGGGCCTCAATGTGGATAATTGCGAGCATCTTCGGGAGATTAGAGGGAGTTCACCATGCTTGACATACTTCACAGCATTAAATTGCAAATCATTGAGTCACATGGGTACAAGCGTGTTACTCAATCAGGAACCAAACAGGAGTGTTGTCAGCTTTACTATGCCAGGAAGGATTCCAAGGTGGTTTGAGCAGCGCTGCAGGGGAGCTTCTATTTCTTTCTGGTTTCGTGGAAACGAATTTCCTATAGAAGCTCTTTGCATTGCCATTCTACTCAGGGATGAGCTCCATTGCAACCCAATTAAAGTAACACCCATTTTGACCATCAACGGCAAACAAGTTTCCTCTCGCTGGAGACCCCAGGTGGATCAATTACTTGTTTCAGACCTGTCAGACAGGGTAGGTTATTATGATAGAGCACTACTTTTTGAGAATGAATGGAATCATGCAAAGCTTTCATATAAAGCACAACAGCTTTCTAAAGGGACATATGGCATTGATGAGTACCATGATGTCCAAATTGATTCAATTGCAAAAGAGATTGGAGTGCAGGTACGAAAGCTAAAGAGGAGTAGCATCATGGAAGATATTCGACTCACCGATCCTTACAAAATGAGAGAATTAATTATAATGATGATGATGGTGTCAATGATATTGCCCAACCACAAGAACCAACCCTTGCTCCTCCAAACACGCATTGGTTTGTGGACATTGCTCTTTCTCACACACACTGCTTTGGACATCAACACTCTCACTTAG 3267 0.3909 MDMQSPFSSIHSINYENQWKYDVFLSFRGKDTRYGFTGNLYEALSGKGINTFFDDDDIQSGDEITPTLLTAIEESRIAIIVLSPNYASSSFCLDELVHILRCIKRNNRLVVPVFYDVDPCDVRHQINSFGKSMTKHEERFKSDLNKVQIWRDALHEVAELSGYHFKQGDGYEHMFIANIVDNISKRITRCPALHVADHPVGLQSQLSEVASLLDVESNAGVHMVGIYGIGGIGKTTLAAEVYNLIADHFEGVCFLEKVRENSNRHGLVHLQTILLTEILREKDIKLTSSKQGASKIHNRLCRKKVLLVLDDVDDPEQLKAIAGKPEWFGPGSRVIITTRDKHLLTLHGIERTYQVQDLNEEDSLNLLTWNAFKSDVVSPNYMNVLSRVVAYASGLPLALESVFLDIACCLKGYSLDEITDLLQAHYGSCMEYQIRVLVEKSLIKVLHGTKVEIHDLIENMGKEIFLEKSPEIPGKRSRLWSCEDIVEVLENKQGTSAVEIIYLEFPFFRRERDEDPMTKEKCEDVQVKWDGTAFKEMTNLKTLIIKNGYFSRSPKHLPNSLRMLEWWRYPARCFPNDFHPKKLTILMLPDYPHAIPELDSLSKAGGLDTLTVLNFDKSEFLKEIPDVSSLQTLQELSFRECKNLVRVDSSVGFLPKLKILNAEYCEKLSCFPPAINLPLLETLKLSYCGSLENFPEILQEMKNVTELFLYNTSIKDLPCSFRNLSGLSYLDMGKNKMCRMPSVIVMMPQLANCTIGNKGKVSGEQEKEGLQLQVEGILTHSLCSSKLKTLHLNNLKEGLSDGFFPLALAWFPNLTLLDLRGSNFTILPECIQEFRFLKGLNVDNCEHLREIRGSSPCLTYFTALNCKSLSHMGTSVLLNQEPNRSVVSFTMPGRIPRWFEQRCRGASISFWFRGNEFPIEALCIAILLRDELHCNPIKVTPILTINGKQVSSRWRPQVDQLLVSDLSDRVGYYDRALLFENEWNHAKLSYKAQQLSKGTYGIDEYHDVQIDSIAKEIGVQVRKLKRSSIMEDIRLTDPYKMRELIIMMMMVSMILPNHKNQPLLLQTRIGLWTLLFLTHTALDINTLT 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241660g00063 1088 SMART till_3 20 160 IPR000157 GO:0007165
Stsc241660g00063 1088 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 163 IPR035897 -
Stsc241660g00063 1088 SUPERFAMILY L domain-like 530 874 - -
Stsc241660g00063 1088 Gene3D Ribonuclease Inhibitor 526 690 IPR032675 -
Stsc241660g00063 1088 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 189 - -
Stsc241660g00063 1088 ProSiteProfiles TIR domain profile. 19 187 IPR000157 GO:0007165
Stsc241660g00063 1088 Gene3D - 188 349 IPR027417 -
Stsc241660g00063 1088 Gene3D Ribonuclease Inhibitor 691 883 IPR032675 -
Stsc241660g00063 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 407 IPR027417 -
Stsc241660g00063 1088 SUPERFAMILY "Winged helix" DNA-binding domain 399 490 IPR036390 -
Stsc241660g00063 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 400 IPR044974 GO:0006952
Stsc241660g00063 1088 PRINTS Disease resistance protein signature 675 691 - -
Stsc241660g00063 1088 PRINTS Disease resistance protein signature 299 313 - -
Stsc241660g00063 1088 PRINTS Disease resistance protein signature 223 238 - -
Stsc241660g00063 1088 PRINTS Disease resistance protein signature 392 406 - -
Stsc241660g00063 1088 Pfam TIR domain 20 186 IPR000157 GO:0007165
Stsc241660g00063 1088 Gene3D - 15 187 IPR035897 -
Stsc241660g00063 1088 Pfam NB-ARC domain 205 402 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241660g00063 Stsc-Chr241660 303747 308337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241660g00063 15 750 WRKY Transcription Factor Family AT4G12020 28.931 2.21e-71 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241660g00063 - - aip:107644584 1267.29