Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241660g00059 | ATGGATCTTCAATCTCCCTTCTCCTCAATCCATTCCTTCAACTATCAACATAAATGGAAATACGATGTGTTTCTTAGCTTTAGAGGCAAAGACACTCGCTACGGTTTCACCGGCAATCTTTATGAAGCCCTTTCCCGCAAAGGAATCAACACCTTCTTTGATGATGACGACATTGAAAGTGGAGACGAAATTACTCCCACACTTCTCAATTCAATTCAGGAGTCCAGGATTGCTATCGTTGTTCTCTCTCCTAATTATGCTTCTTCTTCTTTTTGCTTAGCTGAGCTTGTTCACATCCTTCGTTGCATTAAGGGAAATAATCGCTTGGTTGTGCCAGTTTTCTTTGAGGTGGATCCTTCTGATGTGCGCCATCAAAAAAACACTTTCAAAGAAGCAATGGATAACCATGAGAAGAGATACAAGGATGACATGAACAAGGTGCAAAAATGGAGGGAGGCTCTGACTCAAGTGACTAATTTGTCTGGCTATCATTTCGATCACAGGGATGGATATGAACACATGTTTATTGCAAACATTGTGGAAGACATCTCTAAAAGGATTACACGACGCCAAGCTTTGCATGTTGCTGATCATCCAGTTGGGCTGCAATCCCGAGTGTCAGAGGTAGCTTTACTTCTAGATGTTGAATCTAATGCTGGAGTTCACATGGTAGGGATATATGGAATTGGGGGACTAGGAAAAACCACTCTTGCCGCTGCACTTTACAATTCGATTGCTGACCATTTTGAAGGTGTGTGCTTTCTGGAAAATGTCAGAGAAAATTCAACTAAATGTGGGTTGGCACGTCTTCAAAATATCCTTCTCTGTAAGATATTAGGGAAGGAGGGGGTCCAGATAGTAGGCGTTAAAGAAGGAATCTCACTGATAAAACAAAGGCTTTGTCGAAAGAAAGTTCTTTTGGTTTTAGATGACATTAATGAGCAGGAGCAGTTGAATGCCATTGCTGGAAAACCTGATTGGTTTGGTCCTGGTAGCAGAGTCATTATTACAACACGAGACAAACATTTGCTAACACTTCATGGCGTTGAAAGAACATATGAGGTACAAGTCTTAAATAAGGAACTGTCCTTAGATTTGCTTTCTTGGAAAGCTTTCAAATCTGATATTGTCAACCCAAGGTATGCGAATGTTTTATTCCGTGCAGTAACTTATGCTTCTGGGCTTCCGTTGGCTTTGGAAGTAATAGGTTCTAACTTGTTCGGAAAGGGTTTGGAAGAATGGGAATCTGCATTGGATCAATATGAAAGAAATCTTGATAATAAGATACGTAAGATACTTCAAGTTAGTTTTGATGCTTTGGGAAAAGATGTGCAGAGTGTTTTTCTCGATATTGCTTGCTGTTTTAAAGGATATACACTGATGAAAGTAGCAAATATACTTGAAGCTCATTACGGGAGTTGCATGAGATATCATATTGGAGTGTTGGTTGAAAAATCACTCATAAAGATCCATCAGATTGGTGGAGTGATAATACATGATTTGATAGAGGAAATGGGCAAAGAAATTGTTCTAGAAGAATCACCCAAAATGCCTGGAAAGCGTAGTAGATTATGGTCTTGTGAAGATATAGTTGAAGTTTTAGAAAACAATCAAAAGGGGACAAGTGCCACTGAAATGATATATCTAGAATTTCCTTTATTTAGAAAGGAAGGAGATGGAGATCCAATGACCAAAGAGAAATGTAAAGATGTACAAGTGAAATGGGATGGAACAGCTTTTAAAGAGATGACAAATCTCAAGACTCTCATCATAAAAAATGGATATTTTTCCAGAAGTCCTAAATATTTTCCGAACACTTTAAGAGTATTGAAATGGTGGAGATATCCTTCAAAATGTTTTCCACCTGATTTTCATCCAAAGAAACTTACCATACTGAAGTTACCTGATTATCTCCATAGGTTACCCAAGTTGGATAGCTTGTCCAAGGCAAGTGGGTTGACCACCTTAACTGTTTTGAATTTTGATAACAGTCAGTTTCTAAAAGAAATACCCAATATGTCTAGTCTTGGAACATTACAAAAATTATCTTTCAAGAAATGTAAAAATTTAGTTAGAGTTGACAGTTCAGTTGGCTTTCTACCTAAGCTTAAAATGTTGGATGCTGAATATTGTGAGAAGCTTAGTTGTTTTCCTCCTGCTATCAATTTGCCCTCACTGACAAAACTCGGCCTATCTTATTGTCCAAGGCTCGAGAATTTTCCAGAAATACTACAAGAGATGAAAAATGTAACTAGCCTTCTTTTGGAGGGCACTGGCATAAAAGATTTGCCATGTTCATTTCGTAACCTTTCTGGGTTGTGGGCATTGTTTCTGGAAAGGAATAGAATGTGTAGGATGCCAAGTGTGATTGCCATGATGCCACAACTGGCTTGTTGTGCGATTGAGGGAGGTGGCAATAACGGGAAGGAGGGGCTTCAAGTTGAAGGAATACTCACTCACTCCCTCTGCTCTTCAAAACTAGAATCTCTTTATCTCAACAACTGCGAGCTTTCAGATGGTTTTTTTCCACTGACTGTTGCATGGTTTCCCAATCTGACCATGTTAGATTTAAGTGGCAATAATTTCACAATCCTTCCTGAATGCATTCAAGAATTTCGCTTTCTATGGCAGCTCAATGTGGATAATTGCAAGCATCTTCGGGAGATTAGAGGGAGTCCACCATTCTTGAAAAATTTCTCTGCATTAGGTTGCAAATCATTGAGTCCCAAGGGCACAAGCGTGTTACTAAATCAGGAACCGCACGAGGATAGGTGGATTCATTTTGCTATGCCAGGGAGGATTCCAAGGTGGTTTGAGCAGCACAGCAGGGTACCTTCTATTTCTTTCTGGTTTCGTGGCAATGACTTCCCTGGCAATGCTATTCTCCTGGCCATTCTACTCACCAATGACTTCCATTGCAACCCAATTAAAGTATAA | 2937 | 0.395 | MDLQSPFSSIHSFNYQHKWKYDVFLSFRGKDTRYGFTGNLYEALSRKGINTFFDDDDIESGDEITPTLLNSIQESRIAIVVLSPNYASSSFCLAELVHILRCIKGNNRLVVPVFFEVDPSDVRHQKNTFKEAMDNHEKRYKDDMNKVQKWREALTQVTNLSGYHFDHRDGYEHMFIANIVEDISKRITRRQALHVADHPVGLQSRVSEVALLLDVESNAGVHMVGIYGIGGLGKTTLAAALYNSIADHFEGVCFLENVRENSTKCGLARLQNILLCKILGKEGVQIVGVKEGISLIKQRLCRKKVLLVLDDINEQEQLNAIAGKPDWFGPGSRVIITTRDKHLLTLHGVERTYEVQVLNKELSLDLLSWKAFKSDIVNPRYANVLFRAVTYASGLPLALEVIGSNLFGKGLEEWESALDQYERNLDNKIRKILQVSFDALGKDVQSVFLDIACCFKGYTLMKVANILEAHYGSCMRYHIGVLVEKSLIKIHQIGGVIIHDLIEEMGKEIVLEESPKMPGKRSRLWSCEDIVEVLENNQKGTSATEMIYLEFPLFRKEGDGDPMTKEKCKDVQVKWDGTAFKEMTNLKTLIIKNGYFSRSPKYFPNTLRVLKWWRYPSKCFPPDFHPKKLTILKLPDYLHRLPKLDSLSKASGLTTLTVLNFDNSQFLKEIPNMSSLGTLQKLSFKKCKNLVRVDSSVGFLPKLKMLDAEYCEKLSCFPPAINLPSLTKLGLSYCPRLENFPEILQEMKNVTSLLLEGTGIKDLPCSFRNLSGLWALFLERNRMCRMPSVIAMMPQLACCAIEGGGNNGKEGLQVEGILTHSLCSSKLESLYLNNCELSDGFFPLTVAWFPNLTMLDLSGNNFTILPECIQEFRFLWQLNVDNCKHLREIRGSPPFLKNFSALGCKSLSPKGTSVLLNQEPHEDRWIHFAMPGRIPRWFEQHSRVPSISFWFRGNDFPGNAILLAILLTNDFHCNPIKV | 978 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241660g00059 | 978 | Coils | Coil | 133 | 153 | - | - | |
Stsc241660g00059 | 978 | Gene3D | Ribonuclease Inhibitor | 569 | 739 | IPR032675 | - | |
Stsc241660g00059 | 978 | Coils | Coil | 411 | 431 | - | - | |
Stsc241660g00059 | 978 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 17 | 189 | - | - | |
Stsc241660g00059 | 978 | SMART | till_3 | 20 | 160 | IPR000157 | GO:0007165 | |
Stsc241660g00059 | 978 | Pfam | TIR domain | 20 | 186 | IPR000157 | GO:0007165 | |
Stsc241660g00059 | 978 | Gene3D | - | 14 | 185 | IPR035897 | - | |
Stsc241660g00059 | 978 | ProSiteProfiles | TIR domain profile. | 19 | 187 | IPR000157 | GO:0007165 | |
Stsc241660g00059 | 978 | Pfam | NB-ARC domain | 205 | 439 | IPR002182 | GO:0043531 | |
Stsc241660g00059 | 978 | Gene3D | Ribonuclease Inhibitor | 740 | 914 | IPR032675 | - | |
Stsc241660g00059 | 978 | Gene3D | - | 357 | 441 | IPR042197 | - | |
Stsc241660g00059 | 978 | SUPERFAMILY | "Winged helix" DNA-binding domain | 427 | 535 | IPR036390 | - | |
Stsc241660g00059 | 978 | PRINTS | Disease resistance protein signature | 223 | 238 | - | - | |
Stsc241660g00059 | 978 | PRINTS | Disease resistance protein signature | 392 | 406 | - | - | |
Stsc241660g00059 | 978 | PRINTS | Disease resistance protein signature | 721 | 737 | - | - | |
Stsc241660g00059 | 978 | PRINTS | Disease resistance protein signature | 299 | 313 | - | - | |
Stsc241660g00059 | 978 | SUPERFAMILY | L domain-like | 576 | 908 | - | - | |
Stsc241660g00059 | 978 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 15 | 163 | IPR035897 | - | |
Stsc241660g00059 | 978 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 189 | 451 | IPR027417 | - | |
Stsc241660g00059 | 978 | Gene3D | - | 186 | 350 | IPR027417 | - | |
Stsc241660g00059 | 978 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 21 | 895 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241660g00059 | Stsc-Chr241660 | 287541 | 291704 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241660g00059 | 21 | 803 | WRKY Transcription Factor Family | AT4G12020 | 29.838 | 2.15e-79 | 282 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241660g00059 | - | - | ahf:112751484 | 1294.26 |