Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241660g00057 ATGAATGTTTTATCCCGTGTAGTGACTTATGCTTCTGGGCTTCCGTTGGCTTTGGAAGTAATAGGTTCTAACTTGTTTGGAAAGGATTCAGAAGAATGGGAATCTGCATTCGATCAATATGAAAGAAATCTTGATAATAAGATACGTAAGATCCTTCAAATAAGTTTTGATGCTTTGAAAAACGATGAACAAAGTGTTTTTCTCGACATTGCTTGCTGTCTTAAAGGATATGCATTTGGTGAAGTTATAGACATGCTTCATGCTCATTATGGGAGATGCATGAAATATCATATTGGAGTCTTGGTTCAAAAATCTCTCATAAAGATCAACGGGTATGGTTGGAAAGTGCAAATACATGATTTGATAGAAGATACAGGCAAACAAATTTTTCTAGAAGAGTCACCGGAGATGCCTGGAAAGCGTAGTAGGTTATGGTCTTGTGAAGATATAGTAAAAGTTTTAGAAAGCAATCAAGGGAGTAGTGCCATTGAAATTATATATCTAGAATTTCCTTTCTCTAGAAGGGAAAGAGACGAAGATCCAATGACAGAAGAGAAATGTGAGGATGTGCAAGTGAAGTGGGATGGAACAGCTTTTAAAGAGATGAAAAATCTCAAAACGCTGATCATAAAAAATGGTTATTTTTCAAGAAGTCCTAAACATCTTCCAAACAGTTTAAGAGTGTTGGAATGGTGGAGATATCCTGCAAAATGTTTTCCACATGATTTTCATCCAAAGAAGCTCACCATACTCAAGTTACCTGATTATCTCCATCCGATACGCGAGTTGGATAGCTTATCCCAGGGGTTGGTCACCTTAAAAGTTTTGAATTTTGATTACAGTAAATATCTAAAAGAGATCCCTGATGTGTCTAGTCTTCAAACTTTACAAGAATTATCTTTCAGAGAATGTAAAAATTTAGTTAGAGTTGACAGTTCAGTTGGTTTTCTACCTAAGCTTAAAATATTGAGTGCTCAATATTGTAAGAAGCTTAGTTGTTTTCCATCTGCTATCAATTTGCCCTCGCTGAAAACACTCAGCCTATATGGTTGCCAAAGCCTCGAGAATTTTCCCGAAATACTACAAGAGATGAAACATGTAACTTCGCTTATATTAAAGGGCACTGGCATAAAAGATTTGTCATGTTCATTTCGTAACCTTTCTGGGTTGGAGTATTTGGATATAAGAGAGAATAAAATGTTTTGGATGCCAAGTGTCATTGCCATGATGCCACAGCTGACTAAATGTATCATTAATGGAGTTAGCAATAAGGGGAAGGTATCAGGAAAGCAGGAGAAGGAGGGGCTTCAAGTTGAAGGAATACTCGCTCACTCCCTCTGCTCTTCAAAACTAGAATCTCTTGATCTCATCAACTGCGAGCTTTCGGATGGTTTTTTTCCACTGGCTGTTGCATGGTTTTCCAATCTGACCAGGCTAAACCTAAGTGGCAGTAAGTTCACAGTCCTTCCTGAATGCATTCAAGAATTTCGCTTTCTAGAGAGCCTCTTTGTGGATGATTGCGAGCATCTTCGGGAGATTAGAGGGAGTCCACCACGCTTGACAGACTTCTCAGCATTAAATTGCAAATCATTGAGTCACATGGGCACAAGCGTGTTACTCAATCAGGAACCGCACAGGGATACGTTGATCAAGTTTGTTATGCCAGGAAGGATTCCAAGGTGGTTTGAGCAGCGCAGCAGAGGAGCTTCTATTTCTTTCTGGTTTCGTGGCAACTATTTCCCTGACTATGCTCTTCTCGTTGCCATTCTACTCACAGATAACTTCCATTGCAACCCAATTGAAGTAACAGCCTTTGTGACCATCAACGGCAAAGAAGTACACGTGGACCGGAATAGCGAAATTGATCAATTATTTGTTTTTGATCTGTCAGGTATCACCACCTCTTCTAATAAAAATGGATGGAATCATGCAGAGGTTTCTTTTATAGCACTAAAACGTTATGGTGGGAAATATGATTACCATTGCCTTGATGTCCAAAATGAGTCAATTGTAAAAGAGATTGGAATGCACGTACGGAAGCAAAAGATCAGCAGTATCATGCAAGATATCCGATTCACTGATCCTTACAAAATGACAGGATTAATTATAATGATGATGATGGTGTCAGTGGTATTGCCCAACCACAAGAACCAACCCTTGCTCCTCCAAACACTCATTGGTTTATGGACATTGCTCTTTCTCACACACACAGCTTTTGGTAGCAACACTCTCAGTTAG 2238 0.3905 MNVLSRVVTYASGLPLALEVIGSNLFGKDSEEWESAFDQYERNLDNKIRKILQISFDALKNDEQSVFLDIACCLKGYAFGEVIDMLHAHYGRCMKYHIGVLVQKSLIKINGYGWKVQIHDLIEDTGKQIFLEESPEMPGKRSRLWSCEDIVKVLESNQGSSAIEIIYLEFPFSRRERDEDPMTEEKCEDVQVKWDGTAFKEMKNLKTLIIKNGYFSRSPKHLPNSLRVLEWWRYPAKCFPHDFHPKKLTILKLPDYLHPIRELDSLSQGLVTLKVLNFDYSKYLKEIPDVSSLQTLQELSFRECKNLVRVDSSVGFLPKLKILSAQYCKKLSCFPSAINLPSLKTLSLYGCQSLENFPEILQEMKHVTSLILKGTGIKDLSCSFRNLSGLEYLDIRENKMFWMPSVIAMMPQLTKCIINGVSNKGKVSGKQEKEGLQVEGILAHSLCSSKLESLDLINCELSDGFFPLAVAWFSNLTRLNLSGSKFTVLPECIQEFRFLESLFVDDCEHLREIRGSPPRLTDFSALNCKSLSHMGTSVLLNQEPHRDTLIKFVMPGRIPRWFEQRSRGASISFWFRGNYFPDYALLVAILLTDNFHCNPIEVTAFVTINGKEVHVDRNSEIDQLFVFDLSGITTSSNKNGWNHAEVSFIALKRYGGKYDYHCLDVQNESIVKEIGMHVRKQKISSIMQDIRFTDPYKMTGLIIMMMMVSVVLPNHKNQPLLLQTLIGLWTLLFLTHTAFGSNTLS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241660g00057 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 399 IPR044974 GO:0006952
Stsc241660g00057 745 SUPERFAMILY "Winged helix" DNA-binding domain 46 155 IPR036390 -
Stsc241660g00057 745 PRINTS Disease resistance protein signature 11 25 - -
Stsc241660g00057 745 PRINTS Disease resistance protein signature 338 354 - -
Stsc241660g00057 745 Gene3D Ribonuclease Inhibitor 356 543 IPR032675 -
Stsc241660g00057 745 Gene3D - 1 60 IPR042197 -
Stsc241660g00057 745 Gene3D Ribonuclease Inhibitor 182 355 IPR032675 -
Stsc241660g00057 745 Coils Coil 30 50 - -
Stsc241660g00057 745 SUPERFAMILY L domain-like 195 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241660g00057 Stsc-Chr241660 282490 285040 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241660g00057 7 420 WRKY Transcription Factor Family AT4G12020 29.792 1.80e-37 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241660g00057 - - aip:107644584 869.381