Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241660g00055 ATGAAATATCATATTGGAGTGTTGGTTCAAAAATCTCTCATAAAGATCAAGGGTTATCATTGGAAAGTGGAAATACATGATTTGATAGAAGACACGGGCAAACAAATATTTCTAGAAAAATCACCGGAAATGCCTGGAAAGCGTAGTAGGTTATGGTCTTGTGAGGATATAGTAAAAGTTTTAGAAAACAATCAAGGGACTAGTACCATTGAAATTATATATCTAGAATTTCCCTATTTTAGAAGGGAAAGAGATGAAGATCCAATGACAAAAGATGTAGAAGTGAAATGGGATGGTACAGCTTTCAAAGAGATGAAAAATCTAAAAACGCTAATCATAAAAAATGGTTATTTTTCTACAAGTCCTACACATCTTCCAAACAGCTTAAGAGTGTTGGAATGGTGGAGATATCCTTCAAAATGTTTTCCAAATGGTTTTCATCCAAAGAAGCTCACCATACTCAAATTACCTGATTATCTTCATCCAACACCCGAGTTGGATAGCTTATCCAAGGGGCTGGTCACCTTAACAGTTTTGAATTTTAATTATAGTAAAATTTTAAAAGAGATACCTGATGTGTCTAGTCTTCAAACTTTACAAGAATTATCTTTCTTCGGATGTAAAAATTTAGTTACAATTCACAATTCAGTTGGTTTTTTACCCAAGCTTAAAATATTGAATGCTGATAATTGTAAGAAGCTTAGTCGTTTTCCACCTGCTATCAATTTGCCCTCACTGGAAACACTGGGCCTATCTGGTTGCCAAAGCCTAGAGAATTTTCCAGAAATACTACAAGAGATGAAAAATGTAACTATGCTTTTTATGGAGGGCACTGGCATAAAAGATTTGCCATGTTCATTTCGTAACCTTTCTGGGTTGTCGCATTTGCATATGGAAAAGAATAAAATGTGTAGGATGCCAAGTGTCCTTGCCATGATGCCACAACTGGCTCATTGTCAGATTAAGGGAGGTAGCAATAAGGAGAAGGTATCAGGAAAGCAGGTGAAGGAGGAGCTTCAAGTTGAAGGAATACTCACTCACTTCCTCTGCTCTTCAAAACTAAAAATTCTTGATCTCAACAACTACGAGCTTTCAGATGGTTTTTTTCCACTGGCTGTTGCATGGTTTCCCAAACTGACCGTCTTAGACCTAAGAGGCAATAATTTCACAATCCTTCCTGAATGTATTCAAGAATTTCGGTTTCTGTGGAACCTCAATGTGGATGATTGCGAGCATCTTCGGGAGATTAGAGGGAGTCCACCATTCTTGACAAAGTTCTCAGCAATGAATTGCAAATCATTGAGTCCCATGGGCACAAGCTTGTTACTCAATCAGGAACCACACCAGGATAGGTGGATCGAGTTTGTTATGCCAGGAAGGATTCCAAGGTGGTTTAAGCAACGCAGCAGGGGAGCTTCTATTTCTTTCTGGTTTCGTGGAAACGATTTCCCTGGTGATGCTCTTCTCGTTGCCATTCTACTCACGGATGACTTCCATTGCAACTCAATTCAAGTAACACCCATTGTGATCATCAACGGCAAAAAATTTTCCTTTACGTACAAAACTCTAATCGAGCAACTATTTGTTTTTAATCTGACAAGTTTAACCACCACCTCTCTATGTTTTGTAAATGGATGGAATCATGTGGTGATTTCATATCAAGCAAAACAATTTTCTGAAGGGACATATGAGTTCCATGATGTCCAAATTGAGTCAGTTGCAAAAGAGATTGGAATACACATATTGAAGCAAAAGAGGAGTAGTATCATGCAAGATATTCGGTTCACTGATCCTGACGAAATGACTGAATTAATTATGGTGATGATGATTGTATCAATGGTATTGCCCAACCACAAGAAGCAACCCTTGCTCCGGGAAACACGCATTGGTTTGTGGGCATTGCTCTTTCTAAGTCTAACATACGCATAG 1929 0.3815 MKYHIGVLVQKSLIKIKGYHWKVEIHDLIEDTGKQIFLEKSPEMPGKRSRLWSCEDIVKVLENNQGTSTIEIIYLEFPYFRRERDEDPMTKDVEVKWDGTAFKEMKNLKTLIIKNGYFSTSPTHLPNSLRVLEWWRYPSKCFPNGFHPKKLTILKLPDYLHPTPELDSLSKGLVTLTVLNFNYSKILKEIPDVSSLQTLQELSFFGCKNLVTIHNSVGFLPKLKILNADNCKKLSRFPPAINLPSLETLGLSGCQSLENFPEILQEMKNVTMLFMEGTGIKDLPCSFRNLSGLSHLHMEKNKMCRMPSVLAMMPQLAHCQIKGGSNKEKVSGKQVKEELQVEGILTHFLCSSKLKILDLNNYELSDGFFPLAVAWFPKLTVLDLRGNNFTILPECIQEFRFLWNLNVDDCEHLREIRGSPPFLTKFSAMNCKSLSPMGTSLLLNQEPHQDRWIEFVMPGRIPRWFKQRSRGASISFWFRGNDFPGDALLVAILLTDDFHCNSIQVTPIVIINGKKFSFTYKTLIEQLFVFNLTSLTTTSLCFVNGWNHVVISYQAKQFSEGTYEFHDVQIESVAKEIGIHILKQKRSSIMQDIRFTDPDEMTELIMVMMIVSMVLPNHKKQPLLRETRIGLWALLFLSLTYA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241660g00055 642 Gene3D Ribonuclease Inhibitor 89 258 IPR032675 -
Stsc241660g00055 642 SUPERFAMILY "Winged helix" DNA-binding domain 1 62 IPR036390 -
Stsc241660g00055 642 Gene3D Ribonuclease Inhibitor 259 446 IPR032675 -
Stsc241660g00055 642 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 420 IPR044974 GO:0006952
Stsc241660g00055 642 SUPERFAMILY L domain-like 97 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241660g00055 Stsc-Chr241660 277403 279835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241660g00055 4 323 WRKY Transcription Factor Family AT4G12020 33.038 1.21e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241660g00055 - - aip:107644584 743.806