Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241660g00036 ATGCCTACCATGGAAAAGAATTCTGAGCAGACTGAGATTCAATCTGCATTCGACGAGTTGGCTAAGCAGCCTGCTGACTTTGAGCTTCCAGATTCATTTACCAAGACTAAACCTATGGAATATAAATTTATCAAGCGAAATATATATATCTCAAAGAAGTTAAAGAGACGGATTGATGATGGCATATTCTGTTCCTGTACTCCTTCACCTGAATCTCCTAATGTGTGTGGTATTGACTGCCACTGTGGGGTGCTTTTAGCCTGCTGTTCTTCAGCCTGTAAATGTGGGAGCTCCTGTCTTAACAAACCTTTTCAGCGCCGTCGGATGAAAAAGATGAAATTAGTCCAGACTGAGAAATGTGGCTCTGGTATTGTGGCTGCTGAAGATATTAAGCGTGGGGAATTTGTTATAGAATATGTCGGAGAAGTGATTGATGACGAAACTTGTGAAGAAAGACTTTGGAAGATGAAGCATCGTGGGGATTCAAACTTTTACTTGTGTGAAGTTGAGCGAGATACGGTGATTGATGCCACATATAAGGGAAACAAATCTAGATTTATCAATCATAGTTGCTGTCCCAATACTGATATGCAGAAATGGATAGTAGGAGGGGAAACAAGAGTTGGCATTTTTGCCTCCAAAGACATTCGGAAAGGTGAAGAACTTACTTACGACTACCGGTTTGTCCAATATGGTCCAGACCAGGAATGTCACTGCGGTGCTGTTGGTTGCAGGCGTAAGCTGGGTGTCCAACCTACAAAGCCTAAAATGTCAGTTAAATGCCAGGTATATCAGAATGGAGGTTTGCAAATTGGCAGTTCTCAAGCTGTTGCACGATCGAAGTACTCAAAAGTTTGCATTGGGGAAGTTATTAGGATAAAACACCTTGAAAATGTTTGGGCTTATTAA 909 0.4147 MPTMEKNSEQTEIQSAFDELAKQPADFELPDSFTKTKPMEYKFIKRNIYISKKLKRRIDDGIFCSCTPSPESPNVCGIDCHCGVLLACCSSACKCGSSCLNKPFQRRRMKKMKLVQTEKCGSGIVAAEDIKRGEFVIEYVGEVIDDETCEERLWKMKHRGDSNFYLCEVERDTVIDATYKGNKSRFINHSCCPNTDMQKWIVGGETRVGIFASKDIRKGEELTYDYRFVQYGPDQECHCGAVGCRRKLGVQPTKPKMSVKCQVYQNGGLQIGSSQAVARSKYSKVCIGEVIRIKHLENVWAY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241660g00036 302 PANTHER SET DOMAIN PROTEINS 15 256 - -
Stsc241660g00036 302 SMART set_7 110 233 IPR001214 GO:0005515
Stsc241660g00036 302 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 35 284 IPR025787 -
Stsc241660g00036 302 ProSiteProfiles SET domain profile. 110 227 IPR001214 GO:0005515
Stsc241660g00036 302 Pfam SET domain 121 226 IPR001214 GO:0005515
Stsc241660g00036 302 SUPERFAMILY SET domain 24 239 IPR046341 -
Stsc241660g00036 302 FunFam Histone-lysine N-methyltransferase 27 265 - -
Stsc241660g00036 302 ProSiteProfiles Post-SET domain profile. 233 249 IPR003616 -
Stsc241660g00036 302 SMART shorttest3 59 109 IPR006560 GO:0005634|GO:0042054
Stsc241660g00036 302 Gene3D SET domain 6 266 IPR046341 -
Stsc241660g00036 302 CDD SET_ASHR3-like 111 249 - -
Stsc241660g00036 302 ProSiteProfiles AWS domain profile. 59 108 IPR006560 GO:0005634|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241660g00036 Stsc-Chr241660 201315 209493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241660g00036 89 248 C2H2 Transcription Factor Family AT2G23740 38.333 1.18e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc241660g00036 SET 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241660g00036 - - ahf:112751595 523.472