Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241660g00036 | ATGCCTACCATGGAAAAGAATTCTGAGCAGACTGAGATTCAATCTGCATTCGACGAGTTGGCTAAGCAGCCTGCTGACTTTGAGCTTCCAGATTCATTTACCAAGACTAAACCTATGGAATATAAATTTATCAAGCGAAATATATATATCTCAAAGAAGTTAAAGAGACGGATTGATGATGGCATATTCTGTTCCTGTACTCCTTCACCTGAATCTCCTAATGTGTGTGGTATTGACTGCCACTGTGGGGTGCTTTTAGCCTGCTGTTCTTCAGCCTGTAAATGTGGGAGCTCCTGTCTTAACAAACCTTTTCAGCGCCGTCGGATGAAAAAGATGAAATTAGTCCAGACTGAGAAATGTGGCTCTGGTATTGTGGCTGCTGAAGATATTAAGCGTGGGGAATTTGTTATAGAATATGTCGGAGAAGTGATTGATGACGAAACTTGTGAAGAAAGACTTTGGAAGATGAAGCATCGTGGGGATTCAAACTTTTACTTGTGTGAAGTTGAGCGAGATACGGTGATTGATGCCACATATAAGGGAAACAAATCTAGATTTATCAATCATAGTTGCTGTCCCAATACTGATATGCAGAAATGGATAGTAGGAGGGGAAACAAGAGTTGGCATTTTTGCCTCCAAAGACATTCGGAAAGGTGAAGAACTTACTTACGACTACCGGTTTGTCCAATATGGTCCAGACCAGGAATGTCACTGCGGTGCTGTTGGTTGCAGGCGTAAGCTGGGTGTCCAACCTACAAAGCCTAAAATGTCAGTTAAATGCCAGGTATATCAGAATGGAGGTTTGCAAATTGGCAGTTCTCAAGCTGTTGCACGATCGAAGTACTCAAAAGTTTGCATTGGGGAAGTTATTAGGATAAAACACCTTGAAAATGTTTGGGCTTATTAA | 909 | 0.4147 | MPTMEKNSEQTEIQSAFDELAKQPADFELPDSFTKTKPMEYKFIKRNIYISKKLKRRIDDGIFCSCTPSPESPNVCGIDCHCGVLLACCSSACKCGSSCLNKPFQRRRMKKMKLVQTEKCGSGIVAAEDIKRGEFVIEYVGEVIDDETCEERLWKMKHRGDSNFYLCEVERDTVIDATYKGNKSRFINHSCCPNTDMQKWIVGGETRVGIFASKDIRKGEELTYDYRFVQYGPDQECHCGAVGCRRKLGVQPTKPKMSVKCQVYQNGGLQIGSSQAVARSKYSKVCIGEVIRIKHLENVWAY | 302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241660g00036 | 302 | PANTHER | SET DOMAIN PROTEINS | 15 | 256 | - | - | |
Stsc241660g00036 | 302 | SMART | set_7 | 110 | 233 | IPR001214 | GO:0005515 | |
Stsc241660g00036 | 302 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 35 | 284 | IPR025787 | - | |
Stsc241660g00036 | 302 | ProSiteProfiles | SET domain profile. | 110 | 227 | IPR001214 | GO:0005515 | |
Stsc241660g00036 | 302 | Pfam | SET domain | 121 | 226 | IPR001214 | GO:0005515 | |
Stsc241660g00036 | 302 | SUPERFAMILY | SET domain | 24 | 239 | IPR046341 | - | |
Stsc241660g00036 | 302 | FunFam | Histone-lysine N-methyltransferase | 27 | 265 | - | - | |
Stsc241660g00036 | 302 | ProSiteProfiles | Post-SET domain profile. | 233 | 249 | IPR003616 | - | |
Stsc241660g00036 | 302 | SMART | shorttest3 | 59 | 109 | IPR006560 | GO:0005634|GO:0042054 | |
Stsc241660g00036 | 302 | Gene3D | SET domain | 6 | 266 | IPR046341 | - | |
Stsc241660g00036 | 302 | CDD | SET_ASHR3-like | 111 | 249 | - | - | |
Stsc241660g00036 | 302 | ProSiteProfiles | AWS domain profile. | 59 | 108 | IPR006560 | GO:0005634|GO:0042054 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241660g00036 | Stsc-Chr241660 | 201315 | 209493 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241660g00036 | 89 | 248 | C2H2 Transcription Factor Family | AT2G23740 | 38.333 | 1.18e-25 | 105 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Stsc241660g00036 | SET | 1.5e-21 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241660g00036 | - | - | ahf:112751595 | 523.472 |