Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241660g00014 ATGGAGTGCAATAAGGACGAGGCAAACAGAGCTAAAGAAATTGCAGAGAAGAAGTTTAATGCAAAGGATACTTTGGGTGCAAAGAAATTTGCTTTGAAAGCTCAAAATTTGTTTCCAGATCTTGATGGCATTCCTCAGATGTTAGCAACACTTGATGTGTATGTTGCTGCCGAGCGTAAAATAAATGGAGAAGCGGATTGGTATGGTGTACTTGGCGTTGACCCCTTCGCCGATGATGATACTGTTAGGAAACAATACAGGAAGCTAGCTCTTATGCTTCACCCCGATAAGAACAAATCTGTTGGTGCCGATGGGGCATTTAAACTTATTTCAGAGGCGTGGAGTTTACTATCAGATAAGTCTAAAAGGGCAGCCTACGATGAGAAGAGAAAAACAAAAGCAGGGAAAGTTCCAACAAAGTTTGGAGGTTCATCCGCAGCAACCGGGGCTAATGGCAGTTACAATTTTGCTAAGACTGCCCCTTCAAGTGCAAAGACTCAGAAGAATACTGCTAAAGAACACTCCTCATCTTCTACCTATAAGCCAAAAACAAATACATTTTGGACTGTTTGTCATAGATGCAAAATGCAGTACGAGTATCTCCGAGTCTATCTTAACCTTAAGCTCTTGTGTCCCAATTGCCATGAGGCATTTTTGGCTATAGAAACTGCTCCTCCACCTTCAAGTGGTATTAGGCCTGCAGCTTCATGGGATTTTTCCCAACAAAAGAATCGGTATGTACATAAAAGTAAATCTCATGCAGGAAAGAACGCGGCAGCCTCAAATGTCGGGGCAGGGAAAAACCATAGCAATTCCGATTTCCAGTGGGCTCCATTCTCAAAAACATCTGGTGTTTCTAATGTCGCTCAAGCTGCAAGTGTGGTTCAGCAGGCCTATGATAAGGTGAAGCGAGAACGTGAGGAGGCACAAGCAGCTACCAAAAGGGAAGAGGCCTTACGAAGGAAGCAACATGGTTATAAAACTGGTAAGAGAAAAAGGGGGGCCATGGAGGATGTCAATGGTAAGGAACCTGTAAATCAAATGGGTGTGGGAAATGGAGCAGCAGGACTGCAGAATATTCTTATGGATAAAGCTAGAAAAGAAATTAGCGATAAACTCAGGGAAATTAGGTCAAATACTTTTGATAGTTTAGCTAAAGGGTGTGAGGATGGCTTCAAGAAACCAAATGAGCAAGGTGAAAAACCTTTAAGTAACCCTGATGATTCATGTGCTGAAAACAACATTGCAAAGTCAGAAGACAGTGGAGCCCAACTCATCAATTCATATGCAGGTACTAACACTAGCACTACCATTGCTAAAATTTTGGAAACAATGCCAATAGATGTCCCGGATCCTGATTTTCTTGATTTTGACAAGGATCGAACCGAAGGATCTTTTGGTGAAAATCAAGTGTGGGCACTGTATGACAATGATGATGGGATGCCCCGTTATTATGCAAAGATCCACAGTGTGGTTTCGCTAAATCCGTTCAAGTTGCGTATCTCTTGGCTTTACTCAAACTCCAATGGTGAACTGCCCCCCCTGAATTGGCTTGCTTCGGGCTTTTCAAAAACTTGTGGGGATTTCAGCAGAGGCAAACATGAAATCTGTGATAACATCAATTTCTTTTCTCACAAGGTTAGGTGGAGAAAAGGTGTTCATGGCACCATCTGTATATACCCCAAGAAAGGGGATGTTTGGGCCCTCTATAGGAGTTGGTCTCCTGAATGGAATGAGCTGACAGCTGATGAGGTTATACGCAAGTTTGATATGGTCGAGGTACTCGAGGATTTTAATGAAGAGCACGGTGTAGTTGTTATTCCTCTGCTCAAAGTGTCTGGGTTCAGGACGGTATTTCATCATCACTCGGATCCAAAGGAAATCAGGATAATCCAGAGGGAAGAGATGTTTCGGTTCTCACATCAGGTCCCATCGTATTTATTAACTGGCCAAGAAGCTCCAAATGCCCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCAATTCCATCAGAATTTCTCCAGGTAATAGAAACTGTTAAGGAAGAAGACATGGTGGACAATGAGGATTGTATAATGACAGAAGCTGCAGGCAACAACGCGATTGAGGAGATGATCCCCAATACGAGTAAACCTGGGAAAGAAAGGGAGGGAAGTGATAAAGATATTCCGGAAATGAAAACTTTGAAAGAGGACAATGAGGAGGACATTATAGAGGTAACAGCAAGTGAAAACATGAAAGAAGCTAATTGTGAGGAAATGATCACTGATATGAGCAAACTTGGGGAAGAAAGGGAGGGAGATTTTGAAGATACAGAAGAAATTGAAACTTTGATGGAAGAAAACTAG 2346 0.4267 MECNKDEANRAKEIAEKKFNAKDTLGAKKFALKAQNLFPDLDGIPQMLATLDVYVAAERKINGEADWYGVLGVDPFADDDTVRKQYRKLALMLHPDKNKSVGADGAFKLISEAWSLLSDKSKRAAYDEKRKTKAGKVPTKFGGSSAATGANGSYNFAKTAPSSAKTQKNTAKEHSSSSTYKPKTNTFWTVCHRCKMQYEYLRVYLNLKLLCPNCHEAFLAIETAPPPSSGIRPAASWDFSQQKNRYVHKSKSHAGKNAAASNVGAGKNHSNSDFQWAPFSKTSGVSNVAQAASVVQQAYDKVKREREEAQAATKREEALRRKQHGYKTGKRKRGAMEDVNGKEPVNQMGVGNGAAGLQNILMDKARKEISDKLREIRSNTFDSLAKGCEDGFKKPNEQGEKPLSNPDDSCAENNIAKSEDSGAQLINSYAGTNTSTTIAKILETMPIDVPDPDFLDFDKDRTEGSFGENQVWALYDNDDGMPRYYAKIHSVVSLNPFKLRISWLYSNSNGELPPLNWLASGFSKTCGDFSRGKHEICDNINFFSHKVRWRKGVHGTICIYPKKGDVWALYRSWSPEWNELTADEVIRKFDMVEVLEDFNEEHGVVVIPLLKVSGFRTVFHHHSDPKEIRIIQREEMFRFSHQVPSYLLTGQEAPNAPKGCRVLDPAAIPSEFLQVIETVKEEDMVDNEDCIMTEAAGNNAIEEMIPNTSKPGKEREGSDKDIPEMKTLKEDNEEDIIEVTASENMKEANCEEMITDMSKLGEEREGDFEDTEEIETLMEEN 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241660g00014 781 Pfam Domain of unknown function (DUF3444) 445 652 IPR024593 -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 387 401 - -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 158 180 - -
Stsc241660g00014 781 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 708 733 - -
Stsc241660g00014 781 PRINTS DnaJ domain signature 68 86 IPR001623 -
Stsc241660g00014 781 PRINTS DnaJ domain signature 86 101 IPR001623 -
Stsc241660g00014 781 PRINTS DnaJ domain signature 102 122 IPR001623 -
Stsc241660g00014 781 PANTHER BNAC03G44070D PROTEIN 1 669 - -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 758 781 - -
Stsc241660g00014 781 SMART dnaj_3 65 122 IPR001623 -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 313 334 - -
Stsc241660g00014 781 Coils Coil 292 322 - -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 704 733 - -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 766 781 - -
Stsc241660g00014 781 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Stsc241660g00014 781 MobiDBLite consensus disorder prediction 387 409 - -
Stsc241660g00014 781 CDD DnaJ 66 119 IPR001623 -
Stsc241660g00014 781 Gene3D DnaJ domain 63 180 IPR036869 -
Stsc241660g00014 781 Pfam DnaJ domain 66 127 IPR001623 -
Stsc241660g00014 781 SUPERFAMILY Chaperone J-domain 47 126 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241660g00014 Stsc-Chr241660 86474 89525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241660g00014 4 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.931 2.64e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241660g00014 - - ahf:112751648 1357.04