Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241660g00008 ATGGCTTCAATTGGGGTGTCAGAGATGCTTGGTAACCCTATCAACTTGAGCCGTGCAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTCAAGACTGTGGCTCTTTTTGGTAAGAAGAAGGCAGCACCTCCTCCTCCTCCTAAGAAAGCTGCTGCTGCTGTCACTCCTGCCAATGATGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGAGGGTCTCTTGGACCGATCCGAGATCCCACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATACGAGTTGATTCACGCAAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATTTGGAGCTAACTGCGGTCCTGAGGCCGTTTGGTTCAAGACCGGAGCTCTTCTTCTCGATGGTGGGACACTGAACTACTTTGGTAAGCCCATCCCCATCAACCTCATTGTCGCCGTCGTTGCAGAGGTTGTACTTTTGGGAGGTGCAGAGTACTACAGAATTATCAATGGCCTGGATTTGGAGGACAAGCTTCACCCTGGTGGTCCATTCGACCCGTTGGGACTGGCGAAGGATCCGGACCAAGCAGCATTGTTGAAGGTGAAGGAGATCAAGAATGGAAGGCTTGCCATGTTTGCCATGCTTGGTTTCTACTTCCAAGCATATGTGACAGGAGAAGGCCCAGTTGAGAACCTTGCAAAGCATCTGAGTGACCCCTTTGGCAACAACTTGCTCACTGTCATTGCTGGTTCTGCTGAGAGGGTTCCAACTCTTTGA 855 0.5076 MASIGVSEMLGNPINLSRAARSAPSASSPATFKTVALFGKKKAAPPPPPKKAAAAVTPANDELAKWYGPDRRIFLPEGLLDRSEIPPYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERVPTL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241660g00008 284 Gene3D Chlorophyll a/b binding protein domain 73 284 - -
Stsc241660g00008 284 Pfam Chlorophyll A-B binding protein 86 247 IPR022796 -
Stsc241660g00008 284 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 282 IPR001344 GO:0009765|GO:0016020
Stsc241660g00008 284 FunFam Chlorophyll a-b binding protein, chloroplastic 73 284 - -
Stsc241660g00008 284 SUPERFAMILY Chlorophyll a-b binding protein 65 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241660g00008 Stsc-Chr241660 66166 67995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241660g00008 1 284 Chloroplast and Mitochondria Gene Families AT4G10340 81.404 8.21e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241660g00008 K08916 - gmx:100806585 496.893