Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241659g00021 ATGAACAACAATTCAGTTTCAGACAACAGTTTCTACATTGACAGTGATGAAGAAGATGAGGAGAATAACAAGGATTTGAACAAGGCAGAAGAAGGAGGTGGTGGTGGTGATGGTAGTGATTCAGATTCTTCAGGTTACTCAAATAATGAGAACCCTCCACAGAGAAAACCAAGCTCCTACAATATTTCATGGCCTCAGAGTTACAGGCAGTCAATTGATCTATACAGTAGTGTTCCATCACCAAACATTGGGTTTCTAGGGACACCTTCATTGTCAAGACTAAGCAGTTCTTTTCTCTCAACTTCTCTAACAAGGAGGCACACTCCTGAGGCACTTCCATCTGTTACAAAGCCCTTGATACAGCCGGTGGCGGCCGAGGATGAGGCCGTCCATCATCATCGCCGTAGCTCTCATGCCTTGATTCCTCCAAGAAGGTCTTCTTCTTCCCTTAAGAAGGAATCAAAGGCCTCTCATGAAATTCCAATTTCAAGACACTGTTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGTCCTCTGTGGTGTAGGGATCCTTTCTACACCTTATGCTGCCAAAGAAGGTGGATGGATTGGCCTTTTAATCTTGTTCCTTTTTGCAATTATTTCCTTTTATACCGGTATGCTGCTGCGTTCGTGCTTGGATAGTGAGCCTGGAATTGAGACATATCCTGACATTGGCCAAGCCGCTTTTGGAACTACCGGACGAATCTTCATTTCAATAGTACTGTATGTGGAGTTATATGCATGTTGCATTGAGTATATAATTCTGGAGGGTGACAATTTGTCTTCCTTATTTCCAAGTGCTCACTTAAGTTTGGGAGGAATCGAATTGGATTCGCATACTTTGTTCGCGCTGATTACCACCTTGGCTGTTCTACCTACTGTTATGCTCCGGGACCTAAGCATTCTCAGTTACATCTCAGCCGGTGGAGTTATCGCGTCGGTTTTGGTAGTTATCTGCTTGTTTTGGGTCGGCATTGAGGATGTTGGATTTCAAAGCAAAGGAGCAACACTCAATCTTGCAACTTTTCCTGTTGCTGTTGGTCTCTATGGATACTGCTACTCAGGACATGCAGTGTTTCCAAACATTTATACATCCATGGCAAATCCAAATCAATTCCCTGCAGTGCTCTTAACATGTTTCGGTATCTGTACTGCGCTGTATGCCGGAGCAGCTGTTATGGGATACACAATGTTTGGAGAAGCTATTCTGTCTCAGTTTACTCTTAACATGCCCAAAGAATTAGTTGCTACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACTAAGTATGCATTGACTATATCTCCAGTTGCAATGAGTCTAGAAGAGTTGATACCATCAAGTCAAGCCAAGTCTTACCTATATTCCATCTTCATCAGAACAGGACTAGTAGTTTCAACCCTCATCATTGGCCTTTCTATTCCCTTTTTTGGTCTCGTTATGTCATTGATTGGATCTTCACTCACAATGCTTGTTACTTTGATACTTCCGTGTGCTTGTTTCCTGCGAATCTTGCGAGGCAAAGTCTCGCGAATGCAGGCAGTACTTTGCATAATAATTATCTCAGTAGGTGTTGTTTGTGCTGTTTTCGGAACATACTCTGCGCTCGCCGAAATCGTTAAGAGTTTGAGTGGATGA 1668 0.4293 MNNNSVSDNSFYIDSDEEDEENNKDLNKAEEGGGGGDGSDSDSSGYSNNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPEALPSVTKPLIQPVAAEDEAVHHHRRSSHALIPPRRSSSSLKKESKASHEIPISRHCSFGQAVLNGINVLCGVGILSTPYAAKEGGWIGLLILFLFAIISFYTGMLLRSCLDSEPGIETYPDIGQAAFGTTGRIFISIVLYVELYACCIEYIILEGDNLSSLFPSAHLSLGGIELDSHTLFALITTLAVLPTVMLRDLSILSYISAGGVIASVLVVICLFWVGIEDVGFQSKGATLNLATFPVAVGLYGYCYSGHAVFPNIYTSMANPNQFPAVLLTCFGICTALYAGAAVMGYTMFGEAILSQFTLNMPKELVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSSQAKSYLYSIFIRTGLVVSTLIIGLSIPFFGLVMSLIGSSLTMLVTLILPCACFLRILRGKVSRMQAVLCIIIISVGVVCAVFGTYSALAEIVKSLSG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241659g00021 555 Pfam Transmembrane amino acid transporter protein 166 544 IPR013057 -
Stsc241659g00021 555 MobiDBLite consensus disorder prediction 131 153 - -
Stsc241659g00021 555 FunFam Amino acid transporter AVT1A 164 552 - -
Stsc241659g00021 555 MobiDBLite consensus disorder prediction 40 62 - -
Stsc241659g00021 555 MobiDBLite consensus disorder prediction 1 62 - -
Stsc241659g00021 555 PANTHER OS05G0424000 PROTEIN-RELATED 172 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241659g00021 Stsc-Chr241659 141369 146444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241659g00021 3 488 Amino Acid or Auxin Permease AAAP Family AT2G39130 71.079 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241659g00021 K15015 - gmx:100775840 854.358