Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241659g00014 ATGTGCAAATCCAAAAACAGCATCAACGCCGTACAACCAATGAACAGAAACAGAAATAGAACCCAACCTCGCCGATCAACCTCCACTTCTTCATCATCAGCACCGCCACCACCGCCACCCGTCAACAACAGCTACCCGTCTTCTTCCTCTGAAGTCGCCATCACCGAATCAAGAAGCTACGTTTTCAACAACAAAGATAACAACTACTATTCCTCCAATTCCTATTCCATTTCAAGCAGTGTTGCCTCCCTCTCCAGCCTCAAAAACACGCTCCCTGAAAACCCTCACATCTACGACATCTCCGAGATCGCCGCCGCAACTGCCAATTTCACCCCCGAATCGCACTGCCGCCTTTCCAATTCCTCCTGGCGATGCTCCCTCAGAGACAGAGATGTTGTTGTTTTTCAGCGCAAGTTTCGTAACCACATGGACCTCCCGGAGCTCCGCCACCGTCTCGCATTGATCTGCCGGAGCCACCACAGTAGTCTTGTCAAGCTCCTTGGTGCTTCCGTCTCCGGAAATTACATCTATCTTGTTTATGAATTTGTTCCCGGAGCTAGCCTCGCCGATTGCCTACGCAGCCGCCGGAACCCTAGCTTCACGAACTTGCCGACGTGGATCTCGAGGATGAAGATCGCGTCCGACGTCGCACACGGACTCGATTATATTCACAATTTCTCTGGCTCCGATTCCGGTGACGGTTTTGGATCGGGATTTGTGCATAACCACATCAAGAGCTCAAGCATCGTGGTGGCGGAGGCGGAAGACGGTAACCTCCACGGCAAGATCTGCCACTTCGGTACCTCCGATCTCTGCGGTGAGGCCGTCGATTGCGGCTCCAAAGGCTCCTCCGAGAAATTGAGGAGGTCTCGCAGCAGAACCGTGAAGTTTGAGGGGACGAGGGGGTACATGGCGCCGGAATTTCAGATAACCGGCGTCGCGACGCAGAAGACCGACGTGTACGCGTTCGGAGTGGTGGTTCTGGAGCTGCTGAGCGGCGACGAGGCGTTGAGGTTTGAATTTGACGGAGATGACGGCGAATCTTATCGGAGAGTGAGTGTGGTGGATTCCGCAAGGGTTATGGCGGAGGAGCACGGCGGCGCGAGGAAGTGGGTGGATAAGAGGCTTAGAGATTCGTTTCCCGTTGACGTGGCAGAGAAGATGATCCGGGTCGGGTTAGAGTGTGTTGTGGAGGATCCGAATGAAAGGCCTGATATGGGCCGGGTCGCGGTTGAAGTTTCGAAGTTGTATTTGGAATCGCAGAAGTGGGCTGAAAAAATGGGAACCGTTATTGACTTTACAGTCTCATTGGCGCCTCGGTGA 1323 0.5367 MCKSKNSINAVQPMNRNRNRTQPRRSTSTSSSSAPPPPPPVNNSYPSSSSEVAITESRSYVFNNKDNNYYSSNSYSISSSVASLSSLKNTLPENPHIYDISEIAAATANFTPESHCRLSNSSWRCSLRDRDVVVFQRKFRNHMDLPELRHRLALICRSHHSSLVKLLGASVSGNYIYLVYEFVPGASLADCLRSRRNPSFTNLPTWISRMKIASDVAHGLDYIHNFSGSDSGDGFGSGFVHNHIKSSSIVVAEAEDGNLHGKICHFGTSDLCGEAVDCGSKGSSEKLRRSRSRTVKFEGTRGYMAPEFQITGVATQKTDVYAFGVVVLELLSGDEALRFEFDGDDGESYRRVSVVDSARVMAEEHGGARKWVDKRLRDSFPVDVAEKMIRVGLECVVEDPNERPDMGRVAVEVSKLYLESQKWAEKMGTVIDFTVSLAPR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241659g00014 440 Pfam Protein kinase domain 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241659g00014 440 PANTHER OS09G0572100 PROTEIN 1 440 - -
Stsc241659g00014 440 MobiDBLite consensus disorder prediction 1 31 - -
Stsc241659g00014 440 ProSiteProfiles Protein kinase domain profile. 112 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241659g00014 440 SUPERFAMILY Protein kinase-like (PK-like) 135 413 IPR011009 -
Stsc241659g00014 440 MobiDBLite consensus disorder prediction 1 50 - -
Stsc241659g00014 440 Gene3D Phosphorylase Kinase; domain 1 71 182 - -
Stsc241659g00014 440 Gene3D Transferase(Phosphotransferase) domain 1 184 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241659g00014 Stsc-Chr241659 102649 104893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241659g00014 93 428 Receptor kinase-like Gene Family AT1G51940 30.904 9.05e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc241659g00014 Pkinase 6.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241659g00014 - - mtr:11414164 536.954