Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00071 ATGCTTGTTGGAATTGACGATGTTGAAGTCCCTGAAATGCAAAATGATGAGATACGGGAAAATGGTGATGCAGGTTTCGAATGTAGATCCACCTGTTGCGGGTTTAGGGTCCTTCAAATGGAATTTGATTGTCCCGAAGCTGCTTTTCAGTTCTACGAACAGTATAGTAGGGGCAAGGGATTTTCGATGAGGCACGGCGGGAAATTAAAGAATAAGAATGGAGAAATTATTCGTTACACGTTGTTGTGCAATAGGCAGGGTTTTAGGGAGAAGAAATGGCTTGAAATGCCCGGAAGGAAGAGAGAGCACAAGGCTGTTACTCGATGTGGTTGCCCTACTGAGTTGCGCATAAAACCAAAAGAGGGAGCTAGTAGTTGGTATATTAGACTTCGATGGTTATATTCCTATATTTTGAGGATTTTGAATCTATTCCTGCTTATAAACTATTTGAGAAGCATATGA 462 0.4134 MLVGIDDVEVPEMQNDEIRENGDAGFECRSTCCGFRVLQMEFDCPEAAFQFYEQYSRGKGFSMRHGGKLKNKNGEIIRYTLLCNRQGFREKKWLEMPGRKREHKAVTRCGCPTELRIKPKEGASSWYIRLRWLYSYILRILNLFLLINYLRSI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00071 153 Pfam FAR1 DNA-binding domain 50 128 IPR004330 -
Stsc241657g00071 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00071 Stsc-Chr241657 415912 417343 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241657g00071 FAR1 6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00071 - - aip:107647209 142.124