Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241657g00070 | ATGGGGAAGGGTAGACCTAGGGCTGTGGAGAAGGGTGTAGTTGGGGCCACCAACACTGTTACCTGCTGCGGGTCCACCAGTGTTCCCTCAGCGCTTGTGTATTACCCTACTGAGGATGAATTCAAGGATCCCTTAGATTATATTTACAAGATTAGGCCTGAGGCTGAGCCTTATGGGATTTGTAGGATTGTTCCACCTAAGGGTTGGAACCCTCCTTTTGCTTTGGATCTGGATACTTTTACTTTCCCCACCAAGACTCAGGCCATTCATAAGCTCCAGGCTCGCCCCGCCGCCTCTGACCCCAAGACTTTTGACTTGGAGTACACTAGGTTCTTGCAGGACCACTGTGGTAAGAAGTCTAGGAAGAGGGTTGTGTTTGAAGGGGAGGACTTGGACTTGTGCAAGTTGTTCAATGCGGTTAGGCGCTTTGGCGGGTATGATAAGGTTGTTGATGCCAAGAAGTGGGGGGATGTTGCTAGGTTTTTGAGGCCGGCCGGGAAGATTACGGATTGTGCTAAGCATGTGTTGTGTCAGTTGTACCGCGAGCATTTGTATGATTATGAGGAGTTTTATAATAAGATGAATCAAGGGAATGCTAAGAACTGTAATAAAGGTGAGAGAGATGAGAGTAAGAGTGATCACAGAGTGCAATCCTCCATTTCCAAGAAGCATCCCTGCGGGGTTAGTGGTCTGAAAGTTAAGGATTGTAAAGTTCATGTAGAGGAAGAACACGATCAGATTTGTGAGCAGTGCAAGAGTGGTTTGCACGGTGAAGTCATGCTTTTGTGTGATAGGTGTGATAAGGGCTGGCATATTTATTGTCTTTCCCCACCGTTGAAGCAAATTCCACAGGGAAACTGGTATTGTTTCAGTTGCTTGAATTCTGATAGGGACAGCTTTGGTTTTGTGCCTGGGAAGAAGCATTACACATTGGAAGCTTTTAGGCGTATTGCTGATCGGTCAAGGAGGAGATGGTTTGGAACAGGGCCTGTTTCAAGGGTGCAGATGGAGAAAAAATTTTGGGAGATTGTCGAGGGATCAGTTGGTGAAGTTGAGGTTATGTATGGAAATGACTTGGATACATCTGTATATGGAAGTGGTTTCCCACGAGTCGCTGATCAGAAAATGCAATCCATTGACGACAAGTTATGGCAAGAATACGCAACAAGCCCATGGAATCTCAATAACCTGCCAAAGCTGAAAGGCTCAATGCTTAGATCTATTCAACACAATATCACTGGTGTTATGGTACCCTGGCTATATATTGGGATGTTGTTCTCATCTTTTTGCTGGCACTTTGAAGATCACTGCTTTTACTCAATGAATTATTTACACTGGGGAGAGCCAAAGTGCTGGTACAGTGTTCCTGGCAGTCAAGCCAGTGCTTTTGAGAAGGTGATGAGAAGTAGTCTTCCGGATCTTTTCGATGTGCAACCTGATCTACTTTTCCAGCTTGTTACTATGTTAAACCCTTCTGTCTTGCAAGAAAATGGAGTCCCTGTCTACAGCGTACTCCAGGAGCCTGGGAATTTTGTTATAACCTTCCCACGATCTTATCATGGAGGTTTCAATCTTGGTTTAAATTGTGCAGAGGCAGTCAATTTTGCTCCAGCTGACTGGCTACCTTTTGGTGCATTTGGTGCTGATCTCTATCAGCGGTATCATAAACCTGCTGTATTGTCACATGAGGAGCTTCTTTGTGTAGTAGCCCAGTATGGCGATGTTGACAGCAGAGTATCTTCATATTTGAAGAAAGAATTGTTGAGAATATCAGATAAAGAAAAGTCTTGGAGAGAGAAACTATGGAAAGATGGATCCAATGTGCATTATTTGCCAGCAATATCTCTATCTCTCTGCTGTTGTGTGCAGTTGCCGACCATCATCTTTTGTGTGTCTGGAGATGCTGTAATGGTTGGAAGTGATTTGGATGGACTTCAATATCCGGGATTTTACTATTCTGGGTTTGTTACCTTACTGATGCATTGGGAACACCTTTGTGAGTGTAAGACTGTGAAGCTGCGGCTTCTCTACCGTCATTCTCTTGCAGAATTGTTCGAATTGGCCTTTTCTGTGGAAGAATTTACTTCTGATGACAAAGCTGAATGTAGAAGTGTTAGAAGGCAATCTTCTTGTCAGGGTGCTTTGACCAAAAAGGTGAAAGGTAGCTCTGTTACTTTTGATCAACTTGCTACAGAATGGCTTCTACAGTCTAGTATGATTCTTCAGAATCCTTTTCTGAGCAATGTGTTTGTTACAACACTAAGGAAAGCTGAACAGTTTCTTTGGGCTGGTTCTGAGATGGATTCTGTTCGAGATATGGTGAAGACCTTGGTTGAAGCTCAGAAGTGGGCAGAAGGGATAAGAGATTGTGTAACAAAAATTGAGTTTTGGTATCAAGACTCAAATGCAAAGAAAGTTCGTTTAAAATTCATTGATGAGTTGTTGAGATTTAATCCTCCACCTTGCAATGAGCCTAATTATACTAAATTGAAGGAATACGCTGAAGAAGCAAGGTTATTAGTTCAGGAGATTGATACTGCTTTATCTACATGTTCAAAGATGTCTGAGTTGGAACTTTTATACTCCAGAGCTTGTGGCTTGCCCATCTACATGAAAGAGATTAAGAAATTAGAAGGGAGGATTTCTTCAACTAAGACATGGCTGGACAGCGTTAGAAAGTGTATCGCTGTGAGACATCCTACTGTCTTAGAAGTTGACATTCTTTACCAGTTAAAGTCAGAGATTTCGGATCTTCAAGTTCATCTTCCAGAGAAAGAGGTGCTTGAGAATCTTCTAAGTCAAGCTGAATCTTGTAGCATCCAATGTCGTGAGATGTTAGAAGGGCTTATGAATCTAGAGAATGTTAGTTTGCTGCTTAAGGAATGGGACAATTTTACAGTTGCTGTACCGGAGTTGCAGCTTCTAAGACAATACCATTCAGATACTGTGTTGTGGCTTGCCCGTGTTAATGATGTTTTAGGGAGAGCTCATGTGCAGGGAGATCAACATAATACAGTTAATGAATTGATGTGCATTTTTGAAGAAGGTTCATCTTTAAAAATTCAAGTTGATGAGTTGCCATTAATTGAGATGGAGCTGAAGAAAGCTAGTTGCCGGGAGAAGGCTTTGAAGGCTTGTGATTCTAGAATGCCTTTGGAATTTATTCAGCAACTGCTTGAGGAAGCTACAATGCTACACATTGAGGAAGAGAAACTATTCATTAATTTATCTCGTGTCCTTGCTCTTGCCATACCTTGGGAAGAAAGGGCTAGAGAGATGCTTTCACATGAGAATCCTATTTCTGACTTTGAGGACATGATCAGGGATTCAGAAAACATATTTGCTATTCTTCCTTCGCTTAATGATGTTAAAGATGCACTTTCTGAAGCTAATCTATGGTTAAGGAATTCAAAGCCATATTTAGTCTCTTCTGCGTGTGCTTCAAATTCTTTGCTGAAAGTTGAGGATTTGCAGATGTTGGTTTCTGAATCAAAGCGTCTCAAAATATCTTTGGGAGAAAGAAAGATGCTGGAACTAGTTTTGAAGAACTGCAAACTTTGGGAATGTGAAGCATCTTCTCTATTGGATGATTGTCGGTGCCTTTTCGAATTGGATAACAATGTCGATGGAATAAGCAGTGATTTAATGTTTAGGGTGGAAGATTTGATTGCAAGAATCCAATCTGCTATAGCATCTGGTGTTTCACTTGGTTTTGACTTCATAGAGATTTCAAAACTTAAAGCATCTTGTTCTACACTGCATTGGTGCAAAAGAGCCCTTTGTTTCAGGGATTGTGCTCCTTCTTTAGAGGATGTTTTGGAGGTTGTGGAAGGCCTTTCTCATTCCAGTGTTTCTGGTGCGCTGTTGAAAGTACTGGTTGATGGGGTTGAATGGCTTAGGAGAGCATTGGAGGGAATGTCTCAACCTTGTAATTCAAGAGGATGCCATTTGACTGAGGTTCAAGATACTCTTAACGATTATAAGAATGTTAATATGACTTTTGGAGCAGTATACTGTCAACTTGAAGAAGCCATTAGAAAACATATGTTGTGGCAAGAACAAGTGCACCAATTTTTTGGTCTGAATTCTAGGGATCGATCATGGTCATTGATGTTGCAGCTAAAGGAGCTTGGAGATACTGTTGCTTTCAGTTGCTCAGAACTAGATATGGTTTTATCTGAAGTTGAGAAGGTGGAAAATTGGAAGAAACGATGCAGTGACAAAATAGGAACTTCTGTCCAAAATGACAATTTGCTGTTTAATGCGCTGGAGAAGATAAAACAGAGTCTAGATAGATCATTGTTCATATATGGCGATGTTCAAGAAAGGAAGGATCAAAACCTATGCATCTGCTGTCTCTTGGATTCTGGGTATCAGGAATTTCTTACTTGTTCGACTTGTATGGACTGCTATCATTTGCAGTGCATTGGACTAACAGCAAAGGACACCTGCGTTGAAAACTATAAATGCCCTTACTGTGCAATTTTGATGGGCGAATCATGTTATCCAAGTGGTGGTGGCCTCCTGAGGTTTGGTAAGAAGCATATTGAATTTAAAATTCTCACTGGCCTTCTGTCTGAAGCTGAACATTTCTGCTTGAGGATTGATGAAATGGATGTTCTGAATGAACTTGTTGAGAAAGCCCTTTTGTGCAAATCTTTCTTGAGAGAAATACTAAACTTTGCATCAACTGTTACTGGTGAAGATATAAGCATTCTCTCTGAAAAATTGACGAAAGCTATAAAAGCTAGCGATGTGGCCGGTGTCTATGATGAACATGATAGTTCTGACCTTGAGTTGGCTTTAGCAAAAAACTTGTGGAAAATTCAAGTCAATAGATTGCTAAATGGTGTATGCAAGCCCACAATCAGGCAGATTCAGAAGCATATGAATGAGGGAGTGGATATGGAAATATTGTCCGAAGATCACTATATGCTGAAACTTACAAATGTGAATTGCTTGGGTTTGCACCTAGATAGAGTTTTCGAAGTAATAGAAGAAGGTGAAAAGTTGCCTGTTGATGTAGATGAGGAACTCAAGATGTTGAGGTCTCGATGCATGCTTTATTGTATATGTCGAAAGCCCTATGATAAAAAAGGGATGATAGCATGCAAACAATGCAAAGAGTGGTATCACTTTGATTGCATGAAATTACCATGCACGCAGAAGTTCTACGTTTGTCCTGCGTGCAACCCCTGTGCTGAAGAACCATTGCCAACAAACCATGAGAGATTAACTAGTGCTAAGTTTGTGGAGCCTAAAACCCCATCCCCAAGGCATACAAACCCAAGAAAGAAACAGAAAAGAGATGTGGGCAGTGTCACTTTGAAGATGTTTACAACAACAGCAGAAGAAGATAGAGATAGTAGTAGGTGTAGGAATTCTAATGGGGTAGAATGTCTTAGGTGGCAAAACCGAAAGCCTTTTAGAAGAGCAGCTAAGAAACGTGTTGAGCTTCGAAGTCTTACTCCATTTCTATACACAACGATAAGCGATAAGCGATAA | 5505 | 0.4124 | MGKGRPRAVEKGVVGATNTVTCCGSTSVPSALVYYPTEDEFKDPLDYIYKIRPEAEPYGICRIVPPKGWNPPFALDLDTFTFPTKTQAIHKLQARPAASDPKTFDLEYTRFLQDHCGKKSRKRVVFEGEDLDLCKLFNAVRRFGGYDKVVDAKKWGDVARFLRPAGKITDCAKHVLCQLYREHLYDYEEFYNKMNQGNAKNCNKGERDESKSDHRVQSSISKKHPCGVSGLKVKDCKVHVEEEHDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPQGNWYCFSCLNSDRDSFGFVPGKKHYTLEAFRRIADRSRRRWFGTGPVSRVQMEKKFWEIVEGSVGEVEVMYGNDLDTSVYGSGFPRVADQKMQSIDDKLWQEYATSPWNLNNLPKLKGSMLRSIQHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSQASAFEKVMRSSLPDLFDVQPDLLFQLVTMLNPSVLQENGVPVYSVLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPFGAFGADLYQRYHKPAVLSHEELLCVVAQYGDVDSRVSSYLKKELLRISDKEKSWREKLWKDGSNVHYLPAISLSLCCCVQLPTIIFCVSGDAVMVGSDLDGLQYPGFYYSGFVTLLMHWEHLCECKTVKLRLLYRHSLAELFELAFSVEEFTSDDKAECRSVRRQSSCQGALTKKVKGSSVTFDQLATEWLLQSSMILQNPFLSNVFVTTLRKAEQFLWAGSEMDSVRDMVKTLVEAQKWAEGIRDCVTKIEFWYQDSNAKKVRLKFIDELLRFNPPPCNEPNYTKLKEYAEEARLLVQEIDTALSTCSKMSELELLYSRACGLPIYMKEIKKLEGRISSTKTWLDSVRKCIAVRHPTVLEVDILYQLKSEISDLQVHLPEKEVLENLLSQAESCSIQCREMLEGLMNLENVSLLLKEWDNFTVAVPELQLLRQYHSDTVLWLARVNDVLGRAHVQGDQHNTVNELMCIFEEGSSLKIQVDELPLIEMELKKASCREKALKACDSRMPLEFIQQLLEEATMLHIEEEKLFINLSRVLALAIPWEERAREMLSHENPISDFEDMIRDSENIFAILPSLNDVKDALSEANLWLRNSKPYLVSSACASNSLLKVEDLQMLVSESKRLKISLGERKMLELVLKNCKLWECEASSLLDDCRCLFELDNNVDGISSDLMFRVEDLIARIQSAIASGVSLGFDFIEISKLKASCSTLHWCKRALCFRDCAPSLEDVLEVVEGLSHSSVSGALLKVLVDGVEWLRRALEGMSQPCNSRGCHLTEVQDTLNDYKNVNMTFGAVYCQLEEAIRKHMLWQEQVHQFFGLNSRDRSWSLMLQLKELGDTVAFSCSELDMVLSEVEKVENWKKRCSDKIGTSVQNDNLLFNALEKIKQSLDRSLFIYGDVQERKDQNLCICCLLDSGYQEFLTCSTCMDCYHLQCIGLTAKDTCVENYKCPYCAILMGESCYPSGGGLLRFGKKHIEFKILTGLLSEAEHFCLRIDEMDVLNELVEKALLCKSFLREILNFASTVTGEDISILSEKLTKAIKASDVAGVYDEHDSSDLELALAKNLWKIQVNRLLNGVCKPTIRQIQKHMNEGVDMEILSEDHYMLKLTNVNCLGLHLDRVFEVIEEGEKLPVDVDEELKMLRSRCMLYCICRKPYDKKGMIACKQCKEWYHFDCMKLPCTQKFYVCPACNPCAEEPLPTNHERLTSAKFVEPKTPSPRHTNPRKKQKRDVGSVTLKMFTTTAEEDRDSSRCRNSNGVECLRWQNRKPFRRAAKKRVELRSLTPFLYTTISDKR | 1834 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241657g00070 | 1834 | ProSitePatterns | Zinc finger PHD-type signature. | 1690 | 1730 | IPR019786 | - | |
Stsc241657g00070 | 1834 | ProSiteProfiles | ARID domain profile. | 98 | 192 | IPR001606 | GO:0003677 | |
Stsc241657g00070 | 1834 | Pfam | PLU-1-like protein | 950 | 1196 | IPR013637 | - | |
Stsc241657g00070 | 1834 | Pfam | PLU-1-like protein | 773 | 937 | IPR013637 | - | |
Stsc241657g00070 | 1834 | Pfam | PLU-1-like protein | 1149 | 1406 | IPR013637 | - | |
Stsc241657g00070 | 1834 | Pfam | ARID/BRIGHT DNA binding domain | 111 | 188 | IPR001606 | GO:0003677 | |
Stsc241657g00070 | 1834 | FunFam | Predicted protein | 354 | 557 | - | - | |
Stsc241657g00070 | 1834 | SMART | PHD_3 | 1689 | 1731 | IPR001965 | - | |
Stsc241657g00070 | 1834 | SMART | PHD_3 | 1448 | 1494 | IPR001965 | - | |
Stsc241657g00070 | 1834 | SMART | PHD_3 | 247 | 293 | IPR001965 | - | |
Stsc241657g00070 | 1834 | Pfam | PHD-finger | 247 | 294 | IPR019787 | - | |
Stsc241657g00070 | 1834 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 239 | 294 | IPR013083 | - | |
Stsc241657g00070 | 1834 | SMART | JmjN_1 | 30 | 71 | IPR003349 | - | |
Stsc241657g00070 | 1834 | SUPERFAMILY | FYVE/PHD zinc finger | 1437 | 1495 | IPR011011 | - | |
Stsc241657g00070 | 1834 | CDD | PHD_RSF1 | 248 | 292 | - | - | |
Stsc241657g00070 | 1834 | SMART | cupin_9 | 386 | 552 | IPR003347 | - | |
Stsc241657g00070 | 1834 | CDD | ARID | 100 | 188 | - | - | |
Stsc241657g00070 | 1834 | SMART | ARID_2 | 95 | 188 | - | - | |
Stsc241657g00070 | 1834 | ProSiteProfiles | Zinc finger PHD-type profile. | 245 | 295 | IPR019787 | - | |
Stsc241657g00070 | 1834 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 26 | 947 | - | - | |
Stsc241657g00070 | 1834 | Pfam | jmjN domain | 33 | 65 | IPR003349 | - | |
Stsc241657g00070 | 1834 | ProSitePatterns | Zinc finger PHD-type signature. | 248 | 292 | IPR019786 | - | |
Stsc241657g00070 | 1834 | SUPERFAMILY | FYVE/PHD zinc finger | 238 | 295 | IPR011011 | - | |
Stsc241657g00070 | 1834 | Pfam | JmjC domain, hydroxylase | 419 | 535 | IPR003347 | - | |
Stsc241657g00070 | 1834 | Gene3D | Cupin | 13 | 536 | - | - | |
Stsc241657g00070 | 1834 | Gene3D | - | 98 | 202 | IPR036431 | GO:0003677 | |
Stsc241657g00070 | 1834 | MobiDBLite | consensus disorder prediction | 201 | 222 | - | - | |
Stsc241657g00070 | 1834 | SUPERFAMILY | ARID-like | 81 | 198 | IPR036431 | GO:0003677 | |
Stsc241657g00070 | 1834 | ProSiteProfiles | JmjC domain profile. | 386 | 552 | IPR003347 | - | |
Stsc241657g00070 | 1834 | SUPERFAMILY | Clavaminate synthase-like | 375 | 567 | - | - | |
Stsc241657g00070 | 1834 | SMART | bright_3 | 99 | 193 | IPR001606 | GO:0003677 | |
Stsc241657g00070 | 1834 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1674 | 1732 | IPR013083 | - | |
Stsc241657g00070 | 1834 | MobiDBLite | consensus disorder prediction | 1747 | 1773 | - | - | |
Stsc241657g00070 | 1834 | SUPERFAMILY | FYVE/PHD zinc finger | 1683 | 1738 | IPR011011 | - | |
Stsc241657g00070 | 1834 | ProSiteProfiles | JmjN domain profile. | 31 | 72 | IPR003349 | - | |
Stsc241657g00070 | 1834 | MobiDBLite | consensus disorder prediction | 202 | 220 | - | - | |
Stsc241657g00070 | 1834 | FunFam | Transcription factor jumonji (JmjC) domain-containing protein | 17 | 121 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241657g00070 | Stsc-Chr241657 | 400428 | 414576 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241657g00070 | 31 | 95 | JUMONJI Transcription Factor Family | AT1G08620 | 55.072 | 4.15e-09 | 60.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | ARID | Stsc241657g00070 | PLU-1 | 4.6e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241657g00070 | K11446 | - | gmx:100789512 | 2783.82 |