Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00065 ATGGGTGCTTGCTGTTGCTGTTCTTCCAAGGACACTGATTTGACTGCTCAAAACACCTTCTACTATTACCCAAGAGTATCAGAAGAGCATGTCCCATTATCATCAAATCATGCTGCTGCATCTGTTTTTTCTAGAGGTCTCTTAGTTGACACAAACCAACAAGCTTCAATTCCTGATACTTATACACCACCACCTGCTCCTACACCTTTCAATGTCACATTAGCTCCCAATCCAACTCTGAACGAGGCCTCACCCAAGTTGGAACACCTCAAGGAATCAGGGCTCAAACTGGTACAACCTATCATTTTACATCAAGAGGATGAGGATGCCTGCCCAATTTGTTTAGAAGAGTATGATGCAGAGAATCCAAAACTCACTACAGAATGTGATCACTATTTCCACCTTTCATGCATTCTGGAATGGATGGAAAGGAGTGAAACTTGTCCTGTATGTGATCAGGATATGCTTTTGAACCCTCTCATCATTGACTGA 492 0.4248 MGACCCCSSKDTDLTAQNTFYYYPRVSEEHVPLSSNHAAASVFSRGLLVDTNQQASIPDTYTPPPAPTPFNVTLAPNPTLNEASPKLEHLKESGLKLVQPIILHQEDEDACPICLEEYDAENPKLTTECDHYFHLSCILEWMERSETCPVCDQDMLLNPLIID 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00065 163 SUPERFAMILY RING/U-box 104 157 - -
Stsc241657g00065 163 ProSiteProfiles Zinc finger RING-type profile. 111 152 IPR001841 -
Stsc241657g00065 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 157 IPR013083 -
Stsc241657g00065 163 SMART ring_2 111 151 IPR001841 -
Stsc241657g00065 163 Pfam Ring finger domain 110 151 IPR001841 -
Stsc241657g00065 163 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 37 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00065 Stsc-Chr241657 360168 361014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00065 1 158 C3H Transcription Factor Family AT5G41350 41.346 6.24e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00065 - - adu:107488151 252.292