Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00064 ATGCATGGTTTTGATATCTTCTCACAAATGTTCAAAGAAGAAACCCCAGACCTTGTTTTCACTGATGATGATCCTTTCCCTCTCTTTACACCTCAAGAAAACATAATTGATCCTTTTTCCCTTTCTTCTTTCTTCTCCTTTTCCCCTTCATGCACTAATTTCTCTGCTTTGGATGCCTCTGACTCCCAAATGCACAGTTACCTGCAGAGGAGCTCCAGCTGCAAATTGTTTGATAGAAAACCAGGTTTTCGATCATGTGATGAAGTAGTTCACTCAGACACTTTGATGGATTCCCCAAGTTTTCAGTGGGAAAACGATTTCTTCAGAGGACAGATAAGGAGGGTGTTCAGTGCAGGAGACTTGAAAAAGATGCATGCAACTGAAACATGTTCTGAGAGGGATGAAGCAAAGTTGAAAGTGGGGCGTTACAGTGCCCAAGAAAGGAAAGAGAAAATCTCAAAGTACAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAGTCCGCATACGTGGCAGATTCGCACGCAACCAGGACACCAGCGTGGTTGCAAAAGCTCCATGTTCAAGCTCAAATACACAACAAGACCAAGATGAATTCTGGATTGGAATGATTGAAGCGTTGAATGAGTAA 672 0.4315 MHGFDIFSQMFKEETPDLVFTDDDPFPLFTPQENIIDPFSLSSFFSFSPSCTNFSALDASDSQMHSYLQRSSSCKLFDRKPGFRSCDEVVHSDTLMDSPSFQWENDFFRGQIRRVFSAGDLKKMHATETCSERDEAKLKVGRYSAQERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRVRIRGRFARNQDTSVVAKAPCSSSNTQQDQDEFWIGMIEALNE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00064 223 Pfam CCT motif 148 190 IPR010402 GO:0005515
Stsc241657g00064 223 ProSiteProfiles CCT domain profile. 148 190 IPR010402 GO:0005515
Stsc241657g00064 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 57 203 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00064 Stsc-Chr241657 351586 352847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00064 117 194 C2C2-CO-like Transcription Factor Family AT5G24930 38.462 4.28e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc241657g00064 CCT 2.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00064 - - ahf:112749670 306.99