Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00062 ATGCATGGTTTTGATATCTTCTCACAAATGTTCAAAGAAGAAACCCCAGACCTTGTTTTCACTGATGATGATCCTTTCCCTCTCTTTACACCTCAAGAAAACATAATTGATCCTTTTTCCCTTTCTTCTTTCTTCTCCTTTTCCCCTTCATGCACTAATTTCTCTGCTTTGGATGCCTCTGACTCCCAAATGCACAGTTACCTGCAGAGGAGCTCCAGCTGCAAATTGTTTGATAGAAAACCAGGTTTTCGATCATGTGATGAAGTAGTTCACTCAGACACTTTGATGGATTCCCCAAGTTTTCAGTGGGAAAACGATTTCTTCAGAGGACAGATAAGGAGGGTGTTCAGTGCAGGAGACTTGAAAAAGATGCATGCAACTGAAACATGTTCTGAGAGGGATGAAGCAAAGTTGAAAGTGGGGCGTTACAGTGCCCAAGAAAGGAAAGAGAAAATCTCAAAGTACAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAGTCCGCATACGTGGCAGATTCGCACGCAACCAGGACACCAGCGTGGTTGCAAAAGCTCCATGTTCAAGCTCAAATACACAACAAGACCAAGATGAATTCTGGGTAAATAAATCATCACTTATTTATTAA 669 0.4245 MHGFDIFSQMFKEETPDLVFTDDDPFPLFTPQENIIDPFSLSSFFSFSPSCTNFSALDASDSQMHSYLQRSSSCKLFDRKPGFRSCDEVVHSDTLMDSPSFQWENDFFRGQIRRVFSAGDLKKMHATETCSERDEAKLKVGRYSAQERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRVRIRGRFARNQDTSVVAKAPCSSSNTQQDQDEFWVNKSSLIY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00062 222 Pfam CCT motif 148 190 IPR010402 GO:0005515
Stsc241657g00062 222 ProSiteProfiles CCT domain profile. 148 190 IPR010402 GO:0005515
Stsc241657g00062 222 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 57 199 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00062 Stsc-Chr241657 351586 352847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00062 117 194 C2C2-CO-like Transcription Factor Family AT5G24930 38.462 4.58e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc241657g00062 CCT 2.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00062 - - ahf:112749670 294.664