Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00050 ATGATCATTCCCGAGAAGAACCGCAAGGAGATCTGCAAGTACCTATTCCAAGAGGGAGTATGCTACGCGAAGAAGGACTACAATCTGGCGAAGCACCCTGAGATCGAGGTGCCGAATCTGCAGGTGATTAAGCTTATGCAGAGCTTCAAGTCGAAGGAGTACGTTAGGGAGACCTTCGCCTGGATGCACTATTACTGGTTCCTCACCAATGACGGAATCGAGCATCTCAGGACTTACCTCAACCTTCCTTCTGAGATCGTCCCCGCCACTCTCAAGAAACAGAACAAGCCATCTGGCAGGCCTTTTGGCGGCCCACCTGGTGACCGCCCCAGGGGCCCACCTCGTTTTGACGGAGAACGCAGATTCGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGACCTGGTGGTGACTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTTCTGGTGGAAGGCCTGGCTTTGGTCGGGGTGCTGGTGGTTTTGGAGGTGGTGCTCCAACAAGCTCAAATGCTCCTTAA 546 0.5476 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIEVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQNKPSGRPFGGPPGDRPRGPPRFDGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGSGGRPGFGRGAGGFGGGAPTSSNAP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00050 181 MobiDBLite consensus disorder prediction 112 128 - -
Stsc241657g00050 181 Gene3D - 1 104 IPR036388 -
Stsc241657g00050 181 FunFam 40S ribosomal protein S10 1 104 - -
Stsc241657g00050 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 175 IPR037447 -
Stsc241657g00050 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Stsc241657g00050 181 MobiDBLite consensus disorder prediction 90 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00050 Stsc-Chr241657 289553 291455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00050 1 154 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.290 5.21e-74 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00050 K02947 K09422 bvg:104888371 221.09