Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00047 ATGAGCTTGCAATTGCACGTCTTGATGGACTGGGATTTGCAGGCTATTGTGAGAGGATGCACCAATACTACTCATCATCAAACCGACAACATCCTAAGCCTTAACTATTTTCATTTCTGTCCTCAACAAGAAGATGACCCTCTCTTCAAGTCTCACCATTTCTCATCAGAAACAGAAACCACCACTCTCAACCTTGATGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCTACTGCTGAAACTACAAGTACATCCCACCACCCTAGCCCCGCGCATGAAGTCAACAAAGTACTCCATCTCAAACCTTCAGATCACCCAAATGATCTCAACGATCCATCAGCATCTAAATGTAAAAGAAGATTCAGAAAGAAGAATGAAGAGAAGAATAAGAGGGTAGTGAAGGTGGTTGGAGAAGAAGAAGGGTACAGTGATGGATGGGCATGGCGTAAATACGGGCAGAAACCAATAAAAGGATCAGAGTATCCTCGGAGCTATTATAGGTGCAGCAGCTGCAAAGGATGCTTGGCTAGGAAACGCGTTCAACGCAGCCATTCCGATCCACAAGTTTTCATAGTTACCTACACAGCTGAACACACCCATCCTCCTCATCCTCATATATCCCATCACACTCCAACAAAGAACATGGTGGAATCGCTTCTTGACAAAGAGAACTAA 678 0.4381 MSLQLHVLMDWDLQAIVRGCTNTTHHQTDNILSLNYFHFCPQQEDDPLFKSHHFSSETETTTLNLDDELEELYKPFYPTAETTSTSHHPSPAHEVNKVLHLKPSDHPNDLNDPSASKCKRRFRKKNEEKNKRVVKVVGEEEGYSDGWAWRKYGQKPIKGSEYPRSYYRCSSCKGCLARKRVQRSHSDPQVFIVTYTAEHTHPPHPHISHHTPTKNMVESLLDKEN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00047 225 SUPERFAMILY WRKY DNA-binding domain 139 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00047 225 SMART WRKY_cls 143 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00047 225 Pfam WRKY DNA -binding domain 145 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00047 225 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 209 IPR044810 GO:0003700
Stsc241657g00047 225 MobiDBLite consensus disorder prediction 201 225 - -
Stsc241657g00047 225 Gene3D WRKY domain 126 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00047 225 ProSiteProfiles WRKY domain profile. 138 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00047 Stsc-Chr241657 280028 280926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00047 10 206 WRKY Transcription Factor Family AT4G01250 41.089 3.17e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc241657g00047 WRKY 3.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00047 K13426 - gmx:102667019 149.058