Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00033 ATGGGCGGCAGCTGCAGCTCCACCGCTGCCACCAGCGCACCCTCTTCCCAACCTCGCAACAACAATCGGCCCTCCAATGGCATCAACGTTCTCCATCCCCATTCCAACCCCACTCCCCACAAACCCCCGCCCCCTTCCTCCTCATCCGCCTCCATCGGACGGGTGTTGGGCCGCCCTATGGAGGACGTGCGCTCCACCTACGTCTTCGGTCGGGAGCTGGGGCGGGGTCAATTCGGCGTGACTTACCTCGTCACCCACAAGACCACGCGCGAGCAGTTCGCGTGCAAGTCAATCGCCACGCGCAAGCTGGTCAACCGCGACGACATCGAGGACATCCGCCGTGAGGTGCAGATCATGCACCACCTCACCGGTCACCGCAACATCGTCGAGCTCAAGGCGGCCTACGAGGACCGCCACTCCGTCAACCTTATCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGCATCATCGCCAAGGGGCATTACTCGGAGCGCGCTGCCGCGAACCTCTGCCGCCAGATCGTGACGGTGGTCCACAACTGCCACTCCATGGGTGTGATGCACAGAGACCTCAAGCCCGAGAATTTCTTGTTCCTCAGTAAGGATGAGAACTCCCCTCTCAAAGCCACTGACTTTGGTCTCTCCGTCTTCTTCAAGCCAGGAGATGTGTTTAAAGACCTTGTTGGGAGTGCGTACTATGTTGCCCCTGAGGTGCTGCGTAGAAATTATGGGCCTGAGGCTGATATTTGGAGTGCCGGCGTTATCTTGTACATTCTACTCTCCGGTGTCCCACCCTTCTGGGCAGAAAATGAACAGGGTATATTTGATGCTATTCTTCGTGGACACATTGATTTTGGATCGGATCCTTGGCCATCCATATCTAGCAGTGCCAAAGATCTGGTTAAGAAGATGCTACGTGCTGATGCCAAGGAACGACTTTCGGCAAATGATGTCCTTAACCATCCTTGGATGAGAGAAGATGGAGCATCTGATAAGCCTCTTGACATTGCTGTTCTGAGCAGAATGAAACAATTCAGGGCAATGAACAAGTTAAAGAAAGTTGCTTTGAAGGTAATTGCCGAGAGTCTTTCTGAAGAAGAAATCATTGGCTTGAAAGAGATGTTCAAAAGTATGGACACAGATAACAGTGGAACAATCACTTTTGAAGAATTGAAAGCTGGTCTCCCCAAACTTGGTACCAAGCTTTCTGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCCGATGTAGATGGAAATGGAACTATTGATTATATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAAGATCACCTATATAAGGCCTTTGAATATTTTGACAAGGATAAAAGCGGGTACATTACAATGGAAGAGTTGGAATCTGCCCTCAAGAAGTATAATATGGGTGATGAGAAAACCATAAAGGAAATTATTGCCGAAGTTGACACGGACCATGACGGAAGAATTAACTATGACGAGTTTGCAGCCATGATGAGGAAAGGCAACCCAGACTTGAATGCCAACAGACGCCGCAAATAA 1554 0.5064 MGGSCSSTAATSAPSSQPRNNNRPSNGINVLHPHSNPTPHKPPPPSSSSASIGRVLGRPMEDVRSTYVFGRELGRGQFGVTYLVTHKTTREQFACKSIATRKLVNRDDIEDIRREVQIMHHLTGHRNIVELKAAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAANLCRQIVTVVHNCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFGSDPWPSISSSAKDLVKKMLRADAKERLSANDVLNHPWMREDGASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAESLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDHDGRINYDEFAAMMRKGNPDLNANRRRK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00033 517 Gene3D Phosphorylase Kinase; domain 1 69 152 - -
Stsc241657g00033 517 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Stsc241657g00033 517 Pfam EF-hand domain pair 442 504 IPR002048 GO:0005509
Stsc241657g00033 517 Pfam EF-hand domain pair 372 432 IPR002048 GO:0005509
Stsc241657g00033 517 MobiDBLite consensus disorder prediction 1 53 - -
Stsc241657g00033 517 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Stsc241657g00033 517 MobiDBLite consensus disorder prediction 1 33 - -
Stsc241657g00033 517 SUPERFAMILY EF-hand 364 505 IPR011992 -
Stsc241657g00033 517 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Stsc241657g00033 517 FunFam Calcium-dependent protein kinase 1 332 507 - -
Stsc241657g00033 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Stsc241657g00033 517 CDD STKc_CAMK 67 324 - -
Stsc241657g00033 517 ProSiteProfiles EF-hand calcium-binding domain profile. 475 509 IPR002048 GO:0005509
Stsc241657g00033 517 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Stsc241657g00033 517 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Stsc241657g00033 517 FunFam calcium-dependent protein kinase 1 153 332 - -
Stsc241657g00033 517 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
Stsc241657g00033 517 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Stsc241657g00033 517 FunFam Calcium-dependent protein kinase 1 69 152 - -
Stsc241657g00033 517 Gene3D Transferase(Phosphotransferase) domain 1 153 332 - -
Stsc241657g00033 517 SMART serkin_6 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241657g00033 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 63 499 - -
Stsc241657g00033 517 Pfam Protein kinase domain 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241657g00033 517 SUPERFAMILY Protein kinase-like (PK-like) 64 335 IPR011009 -
Stsc241657g00033 517 Gene3D - 333 507 - -
Stsc241657g00033 517 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Stsc241657g00033 517 ProSiteProfiles Protein kinase domain profile. 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241657g00033 517 SMART efh_1 443 471 IPR002048 GO:0005509
Stsc241657g00033 517 SMART efh_1 407 435 IPR002048 GO:0005509
Stsc241657g00033 517 SMART efh_1 371 399 IPR002048 GO:0005509
Stsc241657g00033 517 SMART efh_1 478 506 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00033 Stsc-Chr241657 203750 207532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00033 53 516 EF-hand Containing Proteins AT4G23650 82.151 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc241657g00033 Pkinase 1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00033 K13412 - gmx:100817321 885.174