Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00021 ATGCTTGTCATGACTACTGGGTGCATTGTTTCTCCCGTGAGTTCACAGAAGACGCTTCATATTGTAGGAGACAGTTTGGGTTGGATTATGCCCAAATACACGGGTTTCTATAACGATTGGGCCAAGAACAGAAAATTTTGTGTTGGTGACCAACTTTTGTTCAATTCCATACCCGGGTTGAACACGGTGGTGCAGGTTGAAAAAGAGGACTACGATCATTGCTCAATGAAGTATACACTGCCTGAGTACTTCATGGGGAACACCATTTTTATGTTGAACAAGCCTGGTGACTACTATTTCATCTCTTCCGTTGGCACGCACTGCGAGGCAAACCAAAAGTTTAAGATCACTGCTACAGAAACAACCACTCAATTCTTCTAA 381 0.4304 MLVMTTGCIVSPVSSQKTLHIVGDSLGWIMPKYTGFYNDWAKNRKFCVGDQLLFNSIPGLNTVVQVEKEDYDHCSMKYTLPEYFMGNTIFMLNKPGDYYFISSVGTHCEANQKFKITATETTTQFF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00021 126 SUPERFAMILY Cupredoxins 18 118 IPR008972 -
Stsc241657g00021 126 Gene3D - 18 125 IPR008972 -
Stsc241657g00021 126 ProSiteProfiles Phytocyanin domain profile. 18 120 IPR003245 GO:0009055
Stsc241657g00021 126 PANTHER BLUE COPPER PROTEIN 19 118 IPR039391 GO:0009055
Stsc241657g00021 126 Pfam Plastocyanin-like domain 28 111 IPR003245 GO:0009055
Stsc241657g00021 126 FunFam Cupredoxin superfamily protein 17 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00021 Stsc-Chr241657 135317 135839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00021 22 113 Phytocyanin Superfamily AT3G18590 41.237 2.37e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00021 - - gmx:102660389 135.576