Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241657g00009 ATGGAGAGTGAAAGTAGTTTGGAGAAGCAAGAACTGAAAAAAGAGCTAGTTCAAGGGATGGAGGTAGCAAGAAAGCTTAAGGCAGAGTTGGGGTTAGAATCTAGTGCACAAAATAGGGACCTGCTGGTGGAGAGAATATTATCTTCTTATGACAAGGCTCTATTGATCCTAAGATGGAATGGATCAGTTTCCAAGTCCCACACATTGCAGCAACCACAGTCCCCTCTACCCAACAAACAGGAACTAAAACACACTTCACAGAAAAGAAAGTTGATGCCCAAATTGGTGAATCGCGTTAAGGTGAATTCTGAGAATGGCTTTGAAGGATCCCATGAAGATGGGTACAGCTGGAGAAAATATGGACAGAAAAACATCCTTGGCAATAAATATCCAAGAAGTTACTACAGGTGCACCTTCCGCAACACTAAGGATTGCTGGGCAACGAAGCAAGTGCAGAGATCAGAGGATGACCACAATATATTTGACATAACTTACAAAGGAAGCCATACCTGTTCCAAGGGGAAGAAGAATGCTGCTATGCCAGCAGAGTCACCAGAGATGCAAGAGAAACCACAAGAAAGCCAAACAAACTTCCAAAACATGTTGACTGTCGCTACGGCTAACCTGGGAAATGAAGAAACGGCATGTTCTTTCACTTCCCCATTGACTTCCTTTGGATTCAGGACACAAGAAAACCAGAACTTTCTTCCTTCAGTTCTAGAGAATGATCCCTTCTCGGGCAGTCTTTTCCAAACACATTTGTTATCACCAAATACACCAGAATCAAACTATTTTCCATCTCCTTTCTGCGCAAATGAGCTTGAAGGAACCTACAGCAATCCATGCTTGGAATTCAAAGTTCCTGAGATCATTTCTGCCCACACATCAACCACCAATTCTCCAATTTTCGATTTCGATTTCTCGGTTGACCCAAATTTTCGTTTCAATGCCTCCAGATTTTCTCGCTAA 969 0.4252 MESESSLEKQELKKELVQGMEVARKLKAELGLESSAQNRDLLVERILSSYDKALLILRWNGSVSKSHTLQQPQSPLPNKQELKHTSQKRKLMPKLVNRVKVNSENGFEGSHEDGYSWRKYGQKNILGNKYPRSYYRCTFRNTKDCWATKQVQRSEDDHNIFDITYKGSHTCSKGKKNAAMPAESPEMQEKPQESQTNFQNMLTVATANLGNEETACSFTSPLTSFGFRTQENQNFLPSVLENDPFSGSLFQTHLLSPNTPESNYFPSPFCANELEGTYSNPCLEFKVPEIISAHTSTTNSPIFDFDFSVDPNFRFNASRFSR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241657g00009 322 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 199 IPR044810 GO:0003700
Stsc241657g00009 322 Gene3D WRKY domain 96 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00009 322 Coils Coil 9 29 - -
Stsc241657g00009 322 ProSiteProfiles WRKY domain profile. 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00009 322 FunFam WRKY transcription factor 53 97 174 - -
Stsc241657g00009 322 MobiDBLite consensus disorder prediction 66 81 - -
Stsc241657g00009 322 Pfam WRKY DNA -binding domain 112 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00009 322 MobiDBLite consensus disorder prediction 66 87 - -
Stsc241657g00009 322 SMART WRKY_cls 111 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241657g00009 322 SUPERFAMILY WRKY DNA-binding domain 110 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241657g00009 Stsc-Chr241657 81218 82386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241657g00009 8 318 WRKY Transcription Factor Family AT4G11070 37.695 2.77e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc241657g00009 WRKY 6.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241657g00009 - - adu:107488322 514.998