Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc23g00038 ATGAAGAGGGTTTTGTTGGTTCCTGTGTTTGTTGCTTTTGCTCTCATTGTTATCTCTCCTGAGGCTTCTGCTAAGAGATGGCTTGTTGGTGATAACATGGGTTGGTCCACTAGCTATGGTGTCAACTACACTAATTGGGCCAAGGGAAAGCATTTCTACCTTGGTGATTGGCTATTCTTTGTGTATGATAGAAACCAAATGAATGTTCTAGAGGTTAACAAGACAGACTATGAAAGTTGCAATTCTGATCACCCTCTTCACAATTGGACTACCGGTGCCGGAAGAGATGTCGTTCCGTTGAATGTGACTCGCAATTACTACTTCATCAGTGGCAAGGGATTCTGCTTTGGTGGAATGAAGCTGGCTGTCCATGTCGAGAAGCTGCCGCCTCCACCGAAGGCATCTCCAGAAGTATCCGGAGCATCACCGACGTTGTACTCAAGAAGCCAGGTTGTTCTGCTGCCCGTTGTCTTCGCCGTTGGGGCGGCATGGGATGCATTCATTCATCTTTTGTAA 516 0.4671 MKRVLLVPVFVAFALIVISPEASAKRWLVGDNMGWSTSYGVNYTNWAKGKHFYLGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCFGGMKLAVHVEKLPPPPKASPEVSGASPTLYSRSQVVLLPVVFAVGAAWDAFIHLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc23g00038 171 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055
Stsc23g00038 171 PANTHER BLUE COPPER PROTEIN 26 135 IPR039391 GO:0009055
Stsc23g00038 171 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
Stsc23g00038 171 Gene3D - 23 128 IPR008972 -
Stsc23g00038 171 FunFam Lamin-like protein 23 128 - -
Stsc23g00038 171 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc23g00038 Stsc-Chr23 235434 237221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc23g00038 4 165 Phytocyanin Superfamily AT5G15350 54.601 2.82e-62 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc23g00038 - - mtr:11412511 262.692