Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc23g00035 ATGGCAGCGGTGGCAATGGTGGTGGCGATAACAGTGGTTGTGATGACGACGATGATCGGGGTGATGGGAGAAGATCTTCATAGGGTTGGAGGTTCCAAAGGATGGCGTCCTGATGTCAACTACACTGATTGGTTTGCTCATGAGAAGACTATCTATGTTGGTGATTGGCTTATATTCTATTTTGACAAGCGATACTACAACGTTCTGGAAGTGAACAAGACAAGCTACGAGCAATGCATAGACAAGGATTTCGTTAAGAACGTGACACGTGGCGGCCGCGACGTGGTTCAGTTGACGGAGCCGAGGGCCTACTACTACCTCTCCAGCGGAGGATACTGCTTCCATCAAATGAGAGTTGCAGTCAACGTTGTTGCCAAAGATGAAGGAAAAGACCATCATACCCCCACTATTGCACCTGCATCTTCAGCACCTTCTCAAAACTCAGCCTCTTCCATTATTATTGTGCCCTCAATTGTGATCGCATGCATTTGGATTGTGATTGTTAATGCGATTAATGTGAGTTTGTTTAATTTTAAGTGA 540 0.4574 MAAVAMVVAITVVVMTTMIGVMGEDLHRVGGSKGWRPDVNYTDWFAHEKTIYVGDWLIFYFDKRYYNVLEVNKTSYEQCIDKDFVKNVTRGGRDVVQLTEPRAYYYLSSGGYCFHQMRVAVNVVAKDEGKDHHTPTIAPASSAPSQNSASSIIIVPSIVIACIWIVIVNAINVSLFNFK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc23g00035 179 Gene3D - 25 136 IPR008972 -
Stsc23g00035 179 ProSiteProfiles Phytocyanin domain profile. 25 125 IPR003245 GO:0009055
Stsc23g00035 179 SUPERFAMILY Cupredoxins 27 124 IPR008972 -
Stsc23g00035 179 Pfam Plastocyanin-like domain 37 110 IPR003245 GO:0009055
Stsc23g00035 179 FunFam Lamin-like protein 23 126 - -
Stsc23g00035 179 PANTHER BLUE COPPER PROTEIN 18 140 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc23g00035 Stsc-Chr23 227466 230260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc23g00035 7 171 Phytocyanin Superfamily AT2G27035 40.120 1.52e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc23g00035 - - ahf:112718354 254.988