Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc23g00001 ATGATGCATCCATCAATGGCTGTCTCAGTTTCAGACAGAGGCAACCATTCTTCTTCTTCTTCTCTGATCCCCAGCTTCCTTTACTCTTCCTCTTCATTCTCTTCCTCTTTGGGAGGAGGCTCTTCTGGTCAGAACTTCATGATTGGTTCTCCCAAGGAACCTAACAATGGAAGAAGGATAGAGATGTTCTCACCAGCATACTATGTTGCTTGTGCCATTGGAGGATCTCTCTCCTGTGGCCTCACTCACACAGCTGTTACACCTCTCGACCTCGTCAAATGTAACATGCAGATTGATCCTTCTAAGTACAAGAGCATCTCTTCTGGATTCGGAGTTCTCTATAGGGAACAAGGACTTAGGGGCTTTTTTAGGGGATGGGGACCTACCCTTTTAGGGTACCATGCACAAGGTGCCTTCAAATATGGACTCTATGAGTACTTCAAGAAATACTATTCTGATCTTGCTGGTCCTGAGTTTGCAACTAAGTATAAGACCTTGATCTACCTTGCCGGTTCCGCGTCTGCTGAGACTATTGCCGGGGTAGCACTCTGTCCCTTTGAGGCCGTCAAGGTTCGAGTTCAGACTCAGCCTGGCTTTGCCCGAGGACTCTCCGATGGCCTACCTAAGATTCTCAGAACCGAAGGAGTCTCAGGGCTGTACAAGGGACTTGTACCTCTATGGGGACGACAGATTCCATATACAATGATGAAGTTTGCATCATATGAGAACACAGTGGAGTTAATATACAAGCACATGGTCCCAACACCAAAGGAAGAAAGCAGTAAAATGGTGCAACTTGGTGTGAGTTTTGCAGGTGGATACATAGCTGGGATATTGTGTGCCGTTGTCTCTCATCCAGCAGACAACCTTGTCTCTTTCCTTAACAATGCTAAAGGGGCAACTGTTTCTGATGCTGTTAATAGACTTGGATTATGGGGACTAGCAACTCGTGGTTTGCCACTTCGGATATTCATGATTGGAACACTCACTGGATCTCAATGGCTCATTNNNNNNNNNNTCAAAGTTGCTGTTGGCCTGCCAACTACTGGTGGTGCTGCTCCTGCTGCTGCTACTACTACTGCAACTCTTACTTCTGATTCTACAACTCAGAGGGCAATAGAAGTTGCTTGA 1131 0.4598 MMHPSMAVSVSDRGNHSSSSSLIPSFLYSSSSFSSSLGGGSSGQNFMIGSPKEPNNGRRIEMFSPAYYVACAIGGSLSCGLTHTAVTPLDLVKCNMQIDPSKYKSISSGFGVLYREQGLRGFFRGWGPTLLGYHAQGAFKYGLYEYFKKYYSDLAGPEFATKYKTLIYLAGSASAETIAGVALCPFEAVKVRVQTQPGFARGLSDGLPKILRTEGVSGLYKGLVPLWGRQIPYTMMKFASYENTVELIYKHMVPTPKEESSKMVQLGVSFAGGYIAGILCAVVSHPADNLVSFLNNAKGATVSDAVNRLGLWGLATRGLPLRIFMIGTLTGSQWLIXXXXKVAVGLPTTGGAAPAAATTTATLTSDSTTQRAIEVA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc23g00001 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 66 150 IPR018108 -
Stsc23g00001 376 SUPERFAMILY Mitochondrial carrier 67 336 IPR023395 -
Stsc23g00001 376 Pfam Mitochondrial carrier protein 166 251 IPR018108 -
Stsc23g00001 376 Pfam Mitochondrial carrier protein 68 152 IPR018108 -
Stsc23g00001 376 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 44 354 IPR044677 GO:0005315|GO:1990547
Stsc23g00001 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 163 247 IPR018108 -
Stsc23g00001 376 Gene3D Mitochondrial carrier domain 67 364 IPR023395 -
Stsc23g00001 376 FunFam Phosphate carrier protein, mitochondrial 66 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc23g00001 Stsc-Chr23 1879 4134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc23g00001 17 357 Chloroplast and Mitochondria Gene Families AT3G48850 70.474 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc23g00001 K15102 - twl:119993760 498.049